Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3556 ATGCCACATAGAGCAACTTACTTTTTCCCGCGTCAATTTCCGGAGCGAGGATTGGATGAATCATCCAAAAAGCTATTAGATCAAGATAAGGACAAAATCGTCAACTCCATCAAATCTCCAATCGAAAACGACACTCCAACCACAAAGTCACTTTCCTCGTCTACTCCTCCAACACCAAAAAACGATGCCGTTTTCTCCTCCGGCAAACATTCCGTCGCCGGTGATAAACTCCGATTCAGACAAAAGCAAATATCTGCTTTCTGCGACTGGTTTATCGACAAAAAACGACACTCCGGTCATCTTACTCACCACTTCCACCGCCGCTTGTCAACCTCCGATGACGATCACGACTTTTTTCATTCTCAGCCAGAGACAGCCGTCAATGACACCGCAATTGACCGGAATTTCGACCGTCAAGTTTCACTTCCGAGGCTATCGAGCGACAGTAGCTATGCAGGGAGTTTGTTTTCCAGTGACATTAAAGAGGAAACGCAGTCGTCTCAAGTTTCCACCATTCCAGCAACCACTGCGAGGAGGCAGAAGGAAGATGATGAAAACAAAGACGGGTTGGTGAAGAAGTGTGAAGAAAGCTATATCCTGCAGCTTACGTTAGCGAAGAGGCTTGCTTCTTTGGCAAGTCTTGTGTCGGAGCCTGTTCTCACTCCTGGCACTGAAAATTGGGATGCTGAGTCTGTTTCTTATCGTCTATGGGTGAGTGGGTGCTTGTCATATACGGATAAGATAAGTGATGGATTTTACAACATACTGGGGATGAATCCGTATCTGTGGGTGATGTGCAATGACGAGGAAGAAGGTAAGAAGATACCCACTTTGATGGCACTTAAAGCCGTTGAACCAAGCGAGGCATCTATGGAGGTGGTGCTTGTCGATAGGCAAGAAGATTCTCGCTTGAAGCTACTTCATGATAAAGCTCAGGAGTTGTATCGTTCTTCAGAGAACACCTTGGTGTTTGTTGAACAACTGGGAAAACTTGTTGCCATAAATATGGGGGGTATATTCCCGGTGGAGCGAGGAGATCTCCACAAACAGTGGAAGTTGGTTAGTAAGAGGTTGAGGAATTTTCACAAGTGTGTTGTACTTCCCATTGGTGGTCTATCTTCTGGTCTTTGTAGGCATCGAGCGATTCTCTTCAAGAGATTGGCTGATTTTATAGGTTTGCCTTGTCGCATAGCTCGTGGTTGCAAGTATTGTGTTGCAGATCACAGATCCTCTTGCTTAGTCAAGATTAAAGATGACAAACAGATCTCAAGGGAATATGTAGTTGACCTTGTCGGGGAACCAGGAATTGTCCATGGCCCAGATTCCTCCATTAATGGAGCATATGTTTCTTCTATTCCTTCGCCGTTTCAAATTTCTCATTTTAAGGAATTACAGTCACCTTATATGGATGATGAAGCAAGTTCTCAACCACCTATTTGTTTTGACCAAAGTTCTTTTGATCCTGAAACTCATCCTTATTTAGGTTGTGGACAGATTGATCAACAAGTTAAAGAAACGGATTTGTTGAAAGTTCAGGGTTCCTTCTGTGCTTCAATTGATCATACATGTGAAGGAACCAAACCACTTCTAACTCCTCTTGGTTTAAAAGAGAATGATGAGGAATGTGCAGTTCTAGGTTCAATTTTGCCTACCATTCATGAGGATGTTTCTAAAGTTTTTCCTGTATCCGAAGAATCATTACACGAATATCCAAGGCTTAGTGAAGATGCAGTTGTGTTACAAGAAACTTCCAGCAATGAGATCATCGTAACTGAAGGTTCTGTGGTAAAGAGTACTTTCAAGCAATGTATACTTAGTTCCTCCTGCCAATCAGAACTGAAACAAGTAGACAATAGAATTGAAAACCAGGACTATTTACCAGCTGGGAATATTCCAAGATATGTGAATCTTGAACCATCACTTTCAATGGACTGGCTTGAGATATCATGGAATGATTTACGGATTAAAGAGCGTGTTGGTGCTGGCTCATTCGGAACTGTGCACCATGCTGAGTGGCATGGATCAGATGTTGCAGTCAAAGTTTTAACAGTTCAGGATTTCCATGATGATCAGTTGAAGGAATTTCTGAGAGAGGTTGCAATAATGAAACGTGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAACATGCCCCAATCTATCAATAGTGACAGAGTATTTGCCTAGAGGTAGTTTATACCACCTAATACACAGGCCAGCATCTGGTGAAATTTTGGATAGTAGGAGAAGATTACGGATGGCTTTGGATGTGGCTAAAGGAATCAATTATCTCCATTGTCTGAAACCTCCAATCGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGACAAAAATTGGACTGTGAAGGTTTGTGATTTTGGACTGTCCAGATTTAAGGCAAACACTTTCATACCCTCAAAATCTGTTGCTGGAACACCTGAGTGGATGGCCCCGGAATTTCTCCGTGGAGAACCTTCGAATGAGAAAGCTGACGTATACAGTTTTGGAGTTATCCTATGGGAACTTGTGACCATGCAACAGCCATGGAGTGGACTTAACCCTCCCCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAAGCTTGCTATCCCTTCAAACATCTCCCCAGTATTGTCCTCCCTCATGGAATCTTGTTGGGCTGATGACCCTGCTCAGCGCCCATCTTTTGGAGGCATAATTGAGTCACTAAGGAAGCTCCTGAAGTCTCCAACAGAGATGATAAAAATGGGTGATACTCACAACCCATAA 2781 0.4344 MPHRATYFFPRQFPERGLDESSKKLLDQDKDKIVNSIKSPIENDTPTTKSLSSSTPPTPKNDAVFSSGKHSVAGDKLRFRQKQISAFCDWFIDKKRHSGHLTHHFHRRLSTSDDDHDFFHSQPETAVNDTAIDRNFDRQVSLPRLSSDSSYAGSLFSSDIKEETQSSQVSTIPATTARRQKEDDENKDGLVKKCEESYILQLTLAKRLASLASLVSEPVLTPGTENWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDEEEGKKIPTLMALKAVEPSEASMEVVLVDRQEDSRLKLLHDKAQELYRSSENTLVFVEQLGKLVAINMGGIFPVERGDLHKQWKLVSKRLRNFHKCVVLPIGGLSSGLCRHRAILFKRLADFIGLPCRIARGCKYCVADHRSSCLVKIKDDKQISREYVVDLVGEPGIVHGPDSSINGAYVSSIPSPFQISHFKELQSPYMDDEASSQPPICFDQSSFDPETHPYLGCGQIDQQVKETDLLKVQGSFCASIDHTCEGTKPLLTPLGLKENDEECAVLGSILPTIHEDVSKVFPVSEESLHEYPRLSEDAVVLQETSSNEIIVTEGSVVKSTFKQCILSSSCQSELKQVDNRIENQDYLPAGNIPRYVNLEPSLSMDWLEISWNDLRIKERVGAGSFGTVHHAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTTCPNLSIVTEYLPRGSLYHLIHRPASGEILDSRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPSNEKADVYSFGVILWELVTMQQPWSGLNPPQVVGAVAFQNRKLAIPSNISPVLSSLMESCWADDPAQRPSFGGIIESLRKLLKSPTEMIKMGDTHNP* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3556 926 MobiDBLite consensus disorder prediction 17 68 - -
Mtr3g3556 926 MobiDBLite consensus disorder prediction 38 65 - -
Mtr3g3556 926 PRINTS Tyrosine kinase catalytic domain signature 727 740 IPR001245 GO:0004672|GO:0006468
Mtr3g3556 926 PRINTS Tyrosine kinase catalytic domain signature 768 786 IPR001245 GO:0004672|GO:0006468
Mtr3g3556 926 PRINTS Tyrosine kinase catalytic domain signature 834 856 IPR001245 GO:0004672|GO:0006468
Mtr3g3556 926 PRINTS Tyrosine kinase catalytic domain signature 878 900 IPR001245 GO:0004672|GO:0006468
Mtr3g3556 926 CDD STKc_MAP3K-like 659 907 - -
Mtr3g3556 926 SUPERFAMILY Protein kinase-like (PK-like) 628 906 IPR011009 -
Mtr3g3556 926 Gene3D Transferase(Phosphotransferase) domain 1 732 920 - -
Mtr3g3556 926 Gene3D Phosphorylase Kinase; domain 1 646 730 - -
Mtr3g3556 926 MobiDBLite consensus disorder prediction 162 188 - -
Mtr3g3556 926 SMART serkin_6 653 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3556 926 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 157 922 - -
Mtr3g3556 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Mtr3g3556 926 MobiDBLite consensus disorder prediction 17 37 - -
Mtr3g3556 926 MobiDBLite consensus disorder prediction 162 176 - -
Mtr3g3556 926 ProSiteProfiles Protein kinase domain profile. 653 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3556 926 Pfam Protein tyrosine and serine/threonine kinase 653 907 IPR001245 GO:0004672|GO:0006468
Mtr3g3556 926 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 157 922 - -
Mtr3g3556 926 ProSitePatterns Protein kinases ATP-binding region signature. 659 680 IPR017441 GO:0005524
Mtr3g3556 926 Pfam Ethylene-responsive protein kinase Le-CTR1 229 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3556 Mtr-Chr3 49426431 49434349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3556 1 921 MAP Kinase Kinase Kinase AT4G24480 54.043 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mtr3g3556 PK_Tyr_Ser-Thr 1.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3556 - - gmx:100808435 1381.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3556 3 49426431 49434349 Mtr3g3556 3 49426431 49434349 ECH
Mtr5g2245 5 29390938 29398976 Mtr3g3556 3 49426431 49434349 PCT
Mtr5g3241 5 41280502 41286896 Mtr3g3556 3 49426431 49434349 PCT