Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3548 ATGAAAAGTGTTAAACCAAATCCATTCGACAAAGACTCAGAACCATTTGTTGAAACTGACCCAACTGGAAGATATGGTAGATACAATGAATTACTTGGATCAGGTTCTTGTAAAAAAGTGTACAAAGCATTTGATCAAGAAGAAGGAATAGAAGTTGCGTGGAATCAAGTCAAACTCAGAAATTTCAGTAATAATGACCCTGCAATGATTCATAGGCTTTACTCTGAAGTTAGATTGCTTAGAAGCATGAGAAACGAAAACATCATTGCCCTTTACTATGTTTGGAGAGATGAAGATCATAACATACTTAATTTCATCACTGAAGTTTGTACAAGTGGGAACTTGAGAGATTATAGGAAGAAACATAAGCATGTTTCTATTAAGGCTTTGAAGAAGTGGTCTAAGCAAATTTTGGAAGGGTTGAATTATTTGCATGTTCATGATCCATGTATCATTCATAGAGATCTCAATTGCAGCAATGTGTTTATCAATGGAAATACTGGCCAGGTTAAGATTGGTGACTTAGGTTTGGCAGCAATTGTTGGAAAGAATCATACAGCACATTCAGTTCTTGGGACACCAGAGTTTATGGCACCTGAATTATATGAAGAGAATTACACTGAATTGGTGGACATATACTCATTTGGAATGTTAGTACTGGAGATGGTGACACGAGAGATTCCTTATAGTGAATGTGACAATGTTGCAAAGATATACAAGAAGGTGTCATCAGGAGTGAGACCACAATCCTTGAACAAGATAAAAGACGCAGAAGTGAAGGCTTTCATTGAAAAGTGTCTTGCAAAACCAAGGGACAGACCTTCTGCTGAGGAATTGCTAAAGGATCCATTCTTTGATGTTTTAGATTATGAAGATGTTGATGATTAA 888 0.3637 MKSVKPNPFDKDSEPFVETDPTGRYGRYNELLGSGSCKKVYKAFDQEEGIEVAWNQVKLRNFSNNDPAMIHRLYSEVRLLRSMRNENIIALYYVWRDEDHNILNFITEVCTSGNLRDYRKKHKHVSIKALKKWSKQILEGLNYLHVHDPCIIHRDLNCSNVFINGNTGQVKIGDLGLAAIVGKNHTAHSVLGTPEFMAPELYEENYTELVDIYSFGMLVLEMVTREIPYSECDNVAKIYKKVSSGVRPQSLNKIKDAEVKAFIEKCLAKPRDRPSAEELLKDPFFDVLDYEDVDD* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3548 295 Pfam Protein kinase domain 29 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3548 295 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 294 - -
Mtr3g3548 295 CDD STKc_WNK 24 285 - -
Mtr3g3548 295 MobiDBLite consensus disorder prediction 1 18 - -
Mtr3g3548 295 MobiDBLite consensus disorder prediction 1 21 - -
Mtr3g3548 295 SUPERFAMILY Protein kinase-like (PK-like) 21 286 IPR011009 -
Mtr3g3548 295 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 3 294 - -
Mtr3g3548 295 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Mtr3g3548 295 ProSiteProfiles Protein kinase domain profile. 26 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3548 295 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3548 Mtr-Chr3 49326732 49327868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3548 10 286 MAP Kinase Kinase Kinase AT5G55560 79.783 1.24e-172 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mtr3g3548 Pkinase 7.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3548 K08867 - gmx:100818126 514.998