Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3539 ATGGCAGAAGACTCACTCACGATACTAGGGTTCTGGGGTAGTCCATTTGTCCTGAGGGTCAAGTGGGCTCTTGAACTAAAAGGGGTTCAATACCAATATGTTGAAGAAGATTTTAAGAACAAGAGTGATATGCTCTTGCAGTATAATCCTGTTTACAAGAAGGTACCTGTTCTTGTGCATGACGGTAAGTCCATATCAGAATCACTAGTGATTCTAGAATATATTGATGAGATCTGGAAGCAAAATCCTCTTCTTCCACATGATCCCTATGAGAGGGCCAAGGCGCGATTCTGGGCTAAATTCGCTGATGAAAAGTGTGTGCCAGCATTTATAGCTACCTTTTCCAAAATAGGAGAGGAACAACAGGAGGCAGCACAAGAAGCTCGTGAGAATTTGAAGATCCTTGAAAGTGGACTTGAGGGAAGGCGCTACTTTGGAGGTGAAAATATAGGCTTTGCTGATATTGCTGTTGGGTTTTTTGGACGCTGGGTTCGAGTGGTAGAAGAAACTGTAGGCATAAACCTAATTGATACAGAGTCCATGGCCAAACTTAGTACTTACTTCGATGACTTTCTTGAGCTTCCTGTTATCAAAGAATGCACGCCGTCTCATGATAAGTTGCTTGAGCACAACAAGGCCTTCCACAAGGTCTTGACATCTTCATCAACTTGA 672 0.4286 MAEDSLTILGFWGSPFVLRVKWALELKGVQYQYVEEDFKNKSDMLLQYNPVYKKVPVLVHDGKSISESLVILEYIDEIWKQNPLLPHDPYERAKARFWAKFADEKCVPAFIATFSKIGEEQQEAAQEARENLKILESGLEGRRYFGGENIGFADIAVGFFGRWVRVVEETVGINLIDTESMAKLSTYFDDFLELPVIKECTPSHDKLLEHNKAFHKVLTSSST* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3539 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Mtr3g3539 223 Coils Coil 118 138 - -
Mtr3g3539 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Mtr3g3539 223 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Mtr3g3539 223 PANTHER - 4 220 - -
Mtr3g3539 223 Pfam Glutathione S-transferase, C-terminal domain 118 195 IPR004046 -
Mtr3g3539 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 220 IPR045073 -
Mtr3g3539 223 CDD GST_N_Tau 6 79 - -
Mtr3g3539 223 Gene3D - 85 222 - -
Mtr3g3539 223 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Mtr3g3539 223 SFLD Main (cytGST) 2 221 - -
Mtr3g3539 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Mtr3g3539 223 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Mtr3g3539 223 SUPERFAMILY GST C-terminal domain-like 77 217 IPR036282 -
Mtr3g3539 223 Gene3D Glutaredoxin 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3539 Mtr-Chr3 49194945 49196263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3539 3 221 Glutathione S-transferase Gene Family AT3G09270 47.059 2.65e-67 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3539 K00799 - gmx:100813267 353.214