Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3518 ATGCCGATCATCAGAAGCGTTACAAGGGAATATATTGGCAAGCCAATAAGATGCAAAGCTGCAATATGCAAAAAATCAGGTGAACCCCTTGTGATAGAGGAAGTTGAATTAGACCCACCTAAATCATGGGAAGTACGGATCAAAATTTTATGCACATCTCTCTGCCACTCTGATGTCACCTTTTGGAAAATGAATTCTTCAGCACCTACTGCTAGGTTTCCAAGAATTTTAGGACACGAAGCTGTGGGACTCGTGGAGAGTGTAGGGGAGAATGTGGAAGAAGTGAAAGAGGGGGACTTGGTCGTGCCAGTGTTCCTCCCAAACTGTGGTGAATGCATAGACTGCGGGAGCACAAAGAGCAACAATTGCACAAAGTTTGGGAACAAACCGATCCGTGACATGCCAAGAGATGGAACAAGCAGGTTTAGAGACATGAAAGGAGAAGTGGTGCATCATTTATTGGGTGTTAGTAGCTTTTCTGAGTATACAGTGGTGGATGTAACCCATGTGGTTAAAATTACTCATGATATTCCTCTTGATAAGGCTTGCTTGCTTAGTTGCGGTGTTTCCACAGGGATTGGGGCAGCGTGGAAGGTGGCGGATGTAGAAAAAGGGACCACGGTGGCTATTTTTGGGCTTGGTGCTGTAGGCTTGGCTGTTGCTGTAGCAGCAAAGCAACGAGGAGCTTCAAAGATTATAGGCGTTGATCTAAATCATGACAAATTTGAAATAGGAAAACAATTTGGAATAACTGATTTTGTGAATCCCTCCTCCACCTCCAACGAGAAATCTGTAAGCGAGGTGATTAAGGATATGACAAATGGAGGAGCTGATTATTGCTTCGAATGCATAGGCTTGGCATCACTAATGACAGAGGCTTTTAATAGCAGTCGAGAAGGTTGGGGGAAAACGGTGATAATTGGGGTGGAAATGCACGGTTCGCCATTGACTTTAAATCCTTATGACATTTTAAAAGGCAAAACCATTACGGGATCACTATTTGGAGGCTTGAAACCAAAATCTGATCTCCCCCTCCTTGCTCAGAAGTACTTAGACAAAGAACTTAACTTGGATGGCTTCATATCACAAGAGGTGGACTTCAAGGATATTAACAAAGCTTTTGACTATCTCCTTCAAGGAAAGAGTATCCGTTGCATTATAAGGATGGATCCTTGA 1176 0.4328 MPIIRSVTREYIGKPIRCKAAICKKSGEPLVIEEVELDPPKSWEVRIKILCTSLCHSDVTFWKMNSSAPTARFPRILGHEAVGLVESVGENVEEVKEGDLVVPVFLPNCGECIDCGSTKSNNCTKFGNKPIRDMPRDGTSRFRDMKGEVVHHLLGVSSFSEYTVVDVTHVVKITHDIPLDKACLLSCGVSTGIGAAWKVADVEKGTTVAIFGLGAVGLAVAVAAKQRGASKIIGVDLNHDKFEIGKQFGITDFVNPSSTSNEKSVSEVIKDMTNGGADYCFECIGLASLMTEAFNSSREGWGKTVIIGVEMHGSPLTLNPYDILKGKTITGSLFGGLKPKSDLPLLAQKYLDKELNLDGFISQEVDFKDINKAFDYLLQGKSIRCIIRMDP* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3518 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Mtr3g3518 391 PANTHER ALCOHOL DEHYDROGENASE 9 388 - -
Mtr3g3518 391 Pfam Alcohol dehydrogenase GroES-like domain 44 173 IPR013154 -
Mtr3g3518 391 Pfam Zinc-binding dehydrogenase 215 339 IPR013149 -
Mtr3g3518 391 Gene3D - 23 385 - -
Mtr3g3518 391 Gene3D - 192 332 - -
Mtr3g3518 391 SUPERFAMILY GroES-like 340 388 IPR011032 -
Mtr3g3518 391 SUPERFAMILY GroES-like 13 198 IPR011032 -
Mtr3g3518 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 177 352 IPR036291 -
Mtr3g3518 391 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 9 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3518 Mtr-Chr3 49037629 49042107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3518 44 379 Monolignol Biosynthesis Gene Families AT2G21730 25.762 3.99e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3518 K00121 - zju:107420743 581.637