Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3507 ATGGTAATTAGCAGCGATCCAGAGAAAACAAACAATCCACACATGGGATTTAAAAAAGATAATGCCTTAAATGTTAAGGAGATGGCAGAGAAGATGATTTTACAGAAGGACTTTGGTGTTGCAAGACTACTTGCAAGGAGGGCTCGAAGCTTGGATCCCAATAATGATGACCTCCCCCAGTTGCTGGAAACCATTGATGTGTATCTCGCTGCTGAAGAAAGAGTTGGTGCAGAAGTGGATTGGTACAAGATCCTTGGTGCACAACCTTTGGATGATGATGAAACGATTCGGAAATGTTATAAGAAGATGGCCTTTAAACTGCACCCTGATAAAAACAAATCAGTGGGTGCGGATGGTGCATTTAGTCTTGTCGCAGAGGCTTGGACTATATTATCTGATAAAGATAAGAGAGCCACCTATGACCAAAAGTACCGCTTGGCAATTAGAGGGATTCCTGTCGGGATACCTCCTAATCCTATACCCGCTAGTCAAAATAGTTTGTTTAATACTGTTAACCTTGGTGAGAGACCTTCTGTACCTGGTGGTCAGAACGGTTTGTTTAATGCTGTTAACCGGAACGACAGAGATCGTATGAGTGCTGCTCACACCAGTCCCACTCCAAGACCTCCTGCACCTGCTAGTCATAATGGTCTGTTTAATGCTGCTATCCAGAAGAACAGAGATCATATGAGTGCTGCTCATACCAATTCTTCTCCAAGAGCCCCTCCTAAATCAGATACTTTTTGGACTGTGTGCAGTTTGTGCAGCACAAAGTATGAATACCTTGCTACTTACAGAAACTGCAATCTTGTTTGTGGCCGCTGCAAGAAACCATTTTATGCTTCCGAGATACCAGCCCCATCTGTACGCAAAAATGCTTCATCCACTTCAAGACCTTCTCAAATGAAGCAGCAAAGCTTCAACTCAACCGGATTGGATAGAAACTGTCATGTTCCAAGTAGGACACCAATGTCTGCTGTCAACTCATCCCTCGGGTCAGGTGCTTTTTCTATGCCTGGTGGCCTTTCCAGTGTACCAACATCGGTTTCTACTGCTGGTGGAGTTCCTGGTCTTTTTATGAGGCCATCTGCGAATTTGAAAAGAAAGCATGAAGACTCGGCACCTGTCATGAGGGAGGAGATACATTTTGGGAAAACTCATGCTGTTGAGAGAACTGTTGCTGGTTCAGCTTTTCAGTCTTCTGGGAAAAAAAGGTGCACTGGTGAGCATAAAGTTGATGGTGCTAGAAGAGACGTGGAAACTGAAATGGCGTCAAAAAAAGGAATGAACTCCACCAATGGGTTTGGGTCTCTGAAGATTAGTTTTGATGCAGGAAAGGTTAGTGCTGCCGGAAATTCCAGACGGAATGGTATTAGTTATATGTCTCAGCAGCAAATGAAGAATATCTTGGCGGAAAAGGCTCAGAAGTTGATTCGTAAGAAGCTTGATGAGTGGAAAGAGAGCCGTAGGAAGCTTGATGAGTGGAAGGAGATCCGTAAAAAACTTGATGAACGGTATCCATCTTCAATATCAAAGAACACTGTCCCAGAAGTTAGAGTGAAGCCTGGTCCAAAAGAAATTGTCAAGTCTGAGAACAAGAACAAACCTATCTCTGCTGATTCAGAGGCGAATGTTTCCGTCTCCATGACTGTTCCAGACCCAGATTTCCATGATTTTGATGGGGATCGAATTGAGGACTCTTTTGGGGAGAACCAGGTGTGGGCAGTATACGATGATGAAGACGGCATGCCGCGCTACTATGTCTTTATCCACTCTGTGATCTCAAAGGATCCTTTCCAGATGAAGATAAGCTGGCTTAGCTCTAAAACCAATGATGAATTGGCACCGATAGAGTGGGTCAGTAACGGCTTTCCAAAGACCACCGGGGATCTCCGATTAGGCAAGCGTGCAACAAGTAACACTCTCAATTCTTTCTCTCACAGGGTCAAGTGGACAAAAGGCTCAAGAGGACTTATCCATATATATCCAAAGAAAGGGGATGTTTGGGCTCTATTTCGGAACTGGTCCCTCGATTGGGATGTAACTACTAACGATGATATCATACATCAATACAACATGGTGGAAGTGCTTGAAGACTACAGTGAAGAACATGGTGTGAATGTTGCTCCGCTTGTCAAGGTTGCAGGTTTCAAGACAGTATTCCGCCAGAATGCTGATCCAAGAAAAATCAGGAACATTCCAAGAGCAGAGATGTTTCGTTTTTCACACCAGGTACCTTCATACTTGCTTACTGGACAAGAAGGTGACAATGCTCCTAAAGGTTGCTTGGAGCTGGATCCTGCTTCAACACCTATGGAACTTCTTCAGGTGATCACTGATGCTCCAACACAAGAAGATTCTGCTGAAGATGTTTGGAGAAAGAAGGTGGATGGAGCACAGGAAGGGAAGGCATGGCCTGAAAATTTGGTCGTATATAAGCGGCAACGCTTGAAGGAAAAAAGGGAGCAGTGA 2472 0.443 MVISSDPEKTNNPHMGFKKDNALNVKEMAEKMILQKDFGVARLLARRARSLDPNNDDLPQLLETIDVYLAAEERVGAEVDWYKILGAQPLDDDETIRKCYKKMAFKLHPDKNKSVGADGAFSLVAEAWTILSDKDKRATYDQKYRLAIRGIPVGIPPNPIPASQNSLFNTVNLGERPSVPGGQNGLFNAVNRNDRDRMSAAHTSPTPRPPAPASHNGLFNAAIQKNRDHMSAAHTNSSPRAPPKSDTFWTVCSLCSTKYEYLATYRNCNLVCGRCKKPFYASEIPAPSVRKNASSTSRPSQMKQQSFNSTGLDRNCHVPSRTPMSAVNSSLGSGAFSMPGGLSSVPTSVSTAGGVPGLFMRPSANLKRKHEDSAPVMREEIHFGKTHAVERTVAGSAFQSSGKKRCTGEHKVDGARRDVETEMASKKGMNSTNGFGSLKISFDAGKVSAAGNSRRNGISYMSQQQMKNILAEKAQKLIRKKLDEWKESRRKLDEWKEIRKKLDERYPSSISKNTVPEVRVKPGPKEIVKSENKNKPISADSEANVSVSMTVPDPDFHDFDGDRIEDSFGENQVWAVYDDEDGMPRYYVFIHSVISKDPFQMKISWLSSKTNDELAPIEWVSNGFPKTTGDLRLGKRATSNTLNSFSHRVKWTKGSRGLIHIYPKKGDVWALFRNWSLDWDVTTNDDIIHQYNMVEVLEDYSEEHGVNVAPLVKVAGFKTVFRQNADPRKIRNIPRAEMFRFSHQVPSYLLTGQEGDNAPKGCLELDPASTPMELLQVITDAPTQEDSAEDVWRKKVDGAQEGKAWPENLVVYKRQRLKEKREQ* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3507 823 CDD DnaJ 80 133 IPR001623 -
Mtr3g3507 823 PANTHER HEAT SHOCK PROTEIN-LIKE 15 789 - -
Mtr3g3507 823 SMART dnaj_3 79 136 IPR001623 -
Mtr3g3507 823 Pfam Domain of unknown function (DUF3444) 548 754 IPR024593 -
Mtr3g3507 823 MobiDBLite consensus disorder prediction 197 217 - -
Mtr3g3507 823 Pfam DnaJ domain 80 141 IPR001623 -
Mtr3g3507 823 SUPERFAMILY Chaperone J-domain 48 140 IPR036869 -
Mtr3g3507 823 MobiDBLite consensus disorder prediction 288 317 - -
Mtr3g3507 823 PRINTS DnaJ domain signature 82 100 IPR001623 -
Mtr3g3507 823 PRINTS DnaJ domain signature 100 115 IPR001623 -
Mtr3g3507 823 PRINTS DnaJ domain signature 116 136 IPR001623 -
Mtr3g3507 823 PRINTS DnaJ domain signature 136 155 IPR001623 -
Mtr3g3507 823 PANTHER BNAC03G44070D PROTEIN 15 789 - -
Mtr3g3507 823 MobiDBLite consensus disorder prediction 287 317 - -
Mtr3g3507 823 ProSiteProfiles dnaJ domain profile. 80 144 IPR001623 -
Mtr3g3507 823 Gene3D DnaJ domain 77 146 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3507 Mtr-Chr3 48914899 48918946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3507 29 291 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 26.217 1.15e-19 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3507 - - mtr:MTR_3g099170 1635.93