Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3506 ATGGTCTCATTGCAAGAAAAGTTGAAGAAATTTGTGGGACACAGATGGGTGGTGTTTGTGTGTGCAATGTGGGATATGTCATTTGCAGGAACAGCTTACATGTTTGGAAGCATATCACCAGTCATAAAGAGCAGCATGGGTTACAATCAGAAGCAAGTAGCTTTCTTAAGTGTGGCTAAGGATTTGGGTGACAACGTTGGACTTCTTGCTGGGTTTATAAGCAAAGCTTGGCCTGTTTGGGCAGTTATACTAGTTGGTGTCCTTCAGAATGTTGTTGGTTATGGTCTTGTTTGGCTTGTTGTAACACACAGGCTTCCTTCTTTGCCTTTATGGACGCTATGCTTTTTCATCTTGGTGGGACAAAATGGTTCAACGTACTACAACACGGCAGCATTGGTTTCCTGTGTGCAAAGTTTCCCAGAAAACCGAGGCCCCGTGGTAGGGATATTGAAAGGATTCGTTGGCTTAAGTGGCGCAATTTGGACTCAAATAATAGCTATGATTAATCTCCCTGATCAAGCCTCTTTGATTTTCATCATAGCAGTTGGTCCAGCAATGGTTTCTTTAACTTTCATGTTCATCATAAGACCTGTTCATACTTTTAATCAATCTAGACCCTCCGATGAATCAGGATTCATGTTTATCTATAGCATTTGTCTTCTCTTAGCTGCCTATTTAATGGGAGTTTTGTTGCTAGAGAATATGTTTGATTTGGATCAAAACATTATCACTTCATTTGCAGTTATTTTGATTGTTTTCATCTTGCTTCCAATTATAGTTCCTATTATATTGGTTTTCTTCTCTAAACCAAAAAGTGCTGATGAGGAACAACTTCTTCAACCATCCATTGTTGCAGCAACTACACCTATGCACAATGAGATTAATGATAATGTCATTTCCAAACATGTTACTTTTGAAGATGCGAAGCCGCAAAAAAATGGTCCACATAGAGGAGAGGATTTTACCTTAACACAAGCAATGGTAAATGCTGATTTTTGGATCATGTTTGTTTCTATCGTCTTAGGCTGTGGGTCGGGATTGACAATGATAAACAACATGGGTCAGATTTGTCAATCTTTGGGCGACAACAATGTTAACATTTATGTATCGGTTATCAGCATATCCAATTTCCTAGGCCGTGTTGGTGGCGGCTACTTCTCTGAAGTTATAGTGAGAAAATTTGGATATCCGAGACTTGTGGCATTGGCAATGATTCAAGCAGTAATGTCTTTGGGACTCTCCTACTATACCATAGGTTTGGTTGGACAAGTTTATGTGATAGCGATAACTATGGGTTTTGGATATGGATCCCATTGGTCAATTGCATTAGCAGCAACTTCAGAAGTATTTGGGTTAAAGAACTTTGGGACTTTGTACAATTTTCTTACAATTGCTAGCCCAGTTGGATCTCTGCTTGTATCTGGATTGGCGAGCACGATATACGACTATTACGCAGAACAGCAAGCAAAGCACAGAATACAAATTTATGGAGCCTCCACGAAATTGGCAATGCCTTATTATGGTACCGGAAATAACAATGAGTTGCTTCTTTGCGAAGGAAACATTTGCTATTCCTTGACTTGTGGAATTTTAGCAGTAGTTTGCTTGGTTGCAGCTGGTTTGAGTTTGATCATTGTTCAAAGGACTAAGAGGTTTTATTCCCAACTTTATGGTAATGGGAAGTCTCTATCTTGA 1695 0.3947 MVSLQEKLKKFVGHRWVVFVCAMWDMSFAGTAYMFGSISPVIKSSMGYNQKQVAFLSVAKDLGDNVGLLAGFISKAWPVWAVILVGVLQNVVGYGLVWLVVTHRLPSLPLWTLCFFILVGQNGSTYYNTAALVSCVQSFPENRGPVVGILKGFVGLSGAIWTQIIAMINLPDQASLIFIIAVGPAMVSLTFMFIIRPVHTFNQSRPSDESGFMFIYSICLLLAAYLMGVLLLENMFDLDQNIITSFAVILIVFILLPIIVPIILVFFSKPKSADEEQLLQPSIVAATTPMHNEINDNVISKHVTFEDAKPQKNGPHRGEDFTLTQAMVNADFWIMFVSIVLGCGSGLTMINNMGQICQSLGDNNVNIYVSVISISNFLGRVGGGYFSEVIVRKFGYPRLVALAMIQAVMSLGLSYYTIGLVGQVYVIAITMGFGYGSHWSIALAATSEVFGLKNFGTLYNFLTIASPVGSLLVSGLASTIYDYYAEQQAKHRIQIYGASTKLAMPYYGTGNNNELLLCEGNICYSLTCGILAVVCLVAAGLSLIIVQRTKRFYSQLYGNGKSLS* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3506 564 Gene3D MFS general substrate transporter like domains 328 553 IPR036259 -
Mtr3g3506 564 PANTHER NODULIN-LIKE/MFS TRANSPORTER 311 561 - -
Mtr3g3506 564 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 307 - -
Mtr3g3506 564 SUPERFAMILY MFS general substrate transporter 14 551 IPR036259 -
Mtr3g3506 564 CDD MFS_Mch1p_like 14 539 - -
Mtr3g3506 564 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 307 - -
Mtr3g3506 564 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 311 561 - -
Mtr3g3506 564 Pfam Nodulin-like 15 262 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3506 Mtr-Chr3 48903840 48906915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3506 5 557 Nodulin-like Gene Family AT5G50630 50.090 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3506 - - mtr:MTR_3g099150 1083.55