Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3492 ATGGCAAGTACAAACATCTCTACAATTGATGAACTGCATGTGACTCAAGGAGAACCGATTCGAGTTCAACCCGCGGAAGAAACAGAAAAGGGACTCTACTTTCTTTCAAACCTTGACCAAAATATTGCAGTTCCAATGCGCACAATTTATTGCTTTAAATCAGAATCTAGAGGAAATGAAGAAGCTGCACATGTGATCAAGGATGCTTTGTCAAAGATTCTTGTCCCTTATTACCCTATGGCAGGAAAGTTGATTATAAGCACAGAAGGGAAGTTGATAGTGGATAACACTGGGGAAGGTGCAGTTTTTGTTGAAGCTGAATCAGATTGTGATATAGATAAAGTTGGCGACTTAACAAAACCAGACCCTCATAGGCTTGGGAAATTGGTTTATGATACCCCAGGTGCTAAGAACATATTAGAGATGCCTCTTATGACAGTTCAGGTGACAAAGTTCAAATGTGGAGGATTCACATTGGGACTGAACATGATCCATTGCATGAAAGATGGACTATGTGCTATGGAGTTTGTGAATGCATGGGCTGAAACAGCTAGAGGTTTAGACTTAAAGACTCCACCATTTCTTGATAGAACCATACTCAAATCACGTGATCCTCCCAAAGTAGAGTTCCAACACCATGAATTTGATGAAATTGAAGATTTATCAAACACAGAAAAAATCTACGAAGGAGAAAACATTATCCACAAATCCTTCCTTTTTAATCCTGAGAAGCTTGATTCACTCAAGAAAAAAGCCACCGAAGACGGAGTTTTGAAAAAATGTTCAACTTTTGAAGCACTCTCAGCTTTTGTATGGAGAACTAGAACTTCAGCTTTAAAAATGCATCCTAATCAACAAACAAAGTTACTCTTTGCAGTTGATGGAAGGCCAAGATTCATTCCCCCAATTCCAAAGGGATATTTTGGTAATGCTATTGTGCTAACAAATTCTTTGTGTAAAGCAAATGAACTATTGGAGAATCCTTTTTCATTTTCAGTTGGCTTGGTTCACAAGGCAATTGATATGGTTACAGATAGTTATATGAGATCTGCTATTGATTATTTTGAAGTTACAAGAGCTAGGCCTTCTTTAACAGGCACACTTTTGATTACAACTTGGACTAAATTGTCTTTTGACACTACTGATTTTGGTTGGGGTGAACCTCTATGTTCTGGTCCTGTTACATTGCCAAATACAGAAGTTATTTTGTTCTTGTCACATGGTCAAGGAAGGAAAGGTATAAGTGTGCTACTTGGCTTGCCTGCTTCTGCTATGGAACGTTTTGAAGAATTGGTGATGATCGAATGA 1308 0.3823 MASTNISTIDELHVTQGEPIRVQPAEETEKGLYFLSNLDQNIAVPMRTIYCFKSESRGNEEAAHVIKDALSKILVPYYPMAGKLIISTEGKLIVDNTGEGAVFVEAESDCDIDKVGDLTKPDPHRLGKLVYDTPGAKNILEMPLMTVQVTKFKCGGFTLGLNMIHCMKDGLCAMEFVNAWAETARGLDLKTPPFLDRTILKSRDPPKVEFQHHEFDEIEDLSNTEKIYEGENIIHKSFLFNPEKLDSLKKKATEDGVLKKCSTFEALSAFVWRTRTSALKMHPNQQTKLLFAVDGRPRFIPPIPKGYFGNAIVLTNSLCKANELLENPFSFSVGLVHKAIDMVTDSYMRSAIDYFEVTRARPSLTGTLLITTWTKLSFDTTDFGWGEPLCSGPVTLPNTEVILFLSHGQGRKGISVLLGLPASAMERFEELVMIE* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3492 435 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 13 432 - -
Mtr3g3492 435 Gene3D - 13 217 IPR023213 -
Mtr3g3492 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 432 - -
Mtr3g3492 435 Pfam Transferase family 13 430 - -
Mtr3g3492 435 Gene3D - 218 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3492 Mtr-Chr3 48802999 48806675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3492 22 433 Monolignol Biosynthesis Gene Families AT5G48930 35.514 5.34e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3492 K15400 - gmx:100794490 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3492 3 48802999 48806675 Mtr3g3492 3 48802999 48806675 ECH