LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g3481	ATGGGTTGCGTGCTTGGTACGCCGGCCAGTGACGGAGACAGAGACCAGCGCCGTCAACGAAGAACTCAGCAGCGTAACGGTTCTTCTGAAGTAACTAATAATGTTGTTAGAGTTCGGGAGAGGCAAAAAAATCGGCATACCGGAGATTTTCCGGTGAATCTACCGGCGCTGGAGCGCCGGAAGCCTATGCTCGATCCGCTATCAGTGAATCAACAAGGTTGGCCGTCTTGGTTGATGGCCGTCGCCGGTGAAGCCATTGGCGATTGGACTCCTCGTCGCGCCAACTCGTTTGAAAAACTTGCTAAGATTGGGCAAGGGACATATAGTAATGTGTATAAAGCAAAAGACTTGGTTACAGGGAAGATAGTAGCATTGAAAAAAGTGAGATTTGATAATTTGGAGCCAGAGAGTGTGAAGTTTATGGCAAGAGAGATACTTGTTTTGAGGAAACTTGATCATCCAAATGTTGTAAAGCTTGAAGGATTGGTTACTTCTAGAATGTCATGTAGTCTTTATTTGGTATTTGAATATATGGAACATGATCTTGCTGGCCTTTCTGCTGGTCAAGGTGTTAAGTTCACTGAACCTCAGGTTAAATGCTTTATGAAGCAATTACTTTCTGGTCTTGAGCATTGCCACAGTCGAGGCGTATTGCATCGCGATATCAAGGGTTCAAATCTGCTTATTGATAATGAAGGAATCCTAAAAATTGCAGATTTTGGGCTGGCAACTTTCTATAATCCTAATAAAAAACAAAGCATGACAAGCAGAGTTGTGACACTTTGGTATCGACCCCCTGAGCTTCTTCTTGGAGCTACATTTTATGGCGTAGGTATTGACCTTTGGAGTGCCGGTTGCATTTTGGCAGAGCTGCTTGCCGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATTTTTAAGTTGTGTGGCTCTCCAGCTGAGGAATATTGGCGGAAGCATAAATTGCCAAACGCTACAATCTTTAAGCCGCAACAGCCATATAAACGCTGTATCTCAGAAACATTCAAGGATTTTCCTCCATCTTCACTACCTCTAATTGACAGTCTTCTTGCAATAGATCCCGATCGCCGTGGAACTGCCTCAGCTGCCCTAAACCATGAATTTTTTACCACCGAGCCCTATGCTTGTGAACCGTCAAGTTTGCCAAAGTATCCTCCTAGCAAAGAATTGGATGTTAAAATGAGAGATGAAGAAGCTAGAAGGCAAAAGGCACTAAATGGAAAAGCTAATGCAGTCGATGGTGCCAAAAGAGTCAGAGCACGTGAGCGTGGTCGAGCCATTCCGGCCCCAGAAGCCAATGCAGAGATCCAAACAAATTTAGATAGGTGGAGAGTTGTGACCCATGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCACCTCATCAAGATGGAGCTGTTGGATATCCACAAGATGAATCAAGTAAAGGACCTGTTTCGTTTGGTGCCTCGGACACATCCTTTAGTTCAGGGACATTCAATGTAAAACCATCTGGACCTACTAGAAGCCATGATGGTACAGGACTTCACAAAGGTACAAAAACTAAAAAAGAAGAGTCTCAGATGGCTTCATCATGGAAATTTATGCGTCCATTTAAGCCATCAACTATTGGACTTTCAATGGATTTATTATTCAGGAGCAAATAA	1683	0.4379	MGCVLGTPASDGDRDQRRQRRTQQRNGSSEVTNNVVRVRERQKNRHTGDFPVNLPALERRKPMLDPLSVNQQGWPSWLMAVAGEAIGDWTPRRANSFEKLAKIGQGTYSNVYKAKDLVTGKIVALKKVRFDNLEPESVKFMAREILVLRKLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLSAGQGVKFTEPQVKCFMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYNPNKKQSMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPAEEYWRKHKLPNATIFKPQQPYKRCISETFKDFPPSSLPLIDSLLAIDPDRRGTASAALNHEFFTTEPYACEPSSLPKYPPSKELDVKMRDEEARRQKALNGKANAVDGAKRVRARERGRAIPAPEANAEIQTNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPQDESSKGPVSFGASDTSFSSGTFNVKPSGPTRSHDGTGLHKGTKTKKEESQMASSWKFMRPFKPSTIGLSMDLLFRSK*	561

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr3g3481	560	ProSitePatterns	Protein kinases ATP-binding region signature.	103	126	IPR017441	GO:0005524
Mtr3g3481	560	SMART	serkin_6	97	381	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr3g3481	560	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	217	229	IPR008271	GO:0004672\|GO:0006468
Mtr3g3481	560	PANTHER	CELL DIVISION PROTEIN KINASE	58	541	-	-
Mtr3g3481	560	MobiDBLite	consensus disorder prediction	426	445	-	-
Mtr3g3481	560	Pfam	Protein kinase domain	97	381	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr3g3481	560	MobiDBLite	consensus disorder prediction	426	440	-	-
Mtr3g3481	560	MobiDBLite	consensus disorder prediction	519	535	-	-
Mtr3g3481	560	MobiDBLite	consensus disorder prediction	1	53	-	-
Mtr3g3481	560	Gene3D	Phosphorylase Kinase; domain 1	84	179	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr3g3481	Mtr-Chr3	48699576	48704061	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr3g3481	89	415	Core Cell Cycle Gene Families	AT5G10270	52.000	1.25e-116	353

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-CRK7-CDK9	Mtr3g3481		Pkinase	3.5e-69	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g3481	K08819		-	gmx:100807756	986.482

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr3g3481	3	48699576	48704061	Mtr3g3481	3	48699576	48704061	ECH

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