Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3481 ATGGGTTGCGTGCTTGGTACGCCGGCCAGTGACGGAGACAGAGACCAGCGCCGTCAACGAAGAACTCAGCAGCGTAACGGTTCTTCTGAAGTAACTAATAATGTTGTTAGAGTTCGGGAGAGGCAAAAAAATCGGCATACCGGAGATTTTCCGGTGAATCTACCGGCGCTGGAGCGCCGGAAGCCTATGCTCGATCCGCTATCAGTGAATCAACAAGGTTGGCCGTCTTGGTTGATGGCCGTCGCCGGTGAAGCCATTGGCGATTGGACTCCTCGTCGCGCCAACTCGTTTGAAAAACTTGCTAAGATTGGGCAAGGGACATATAGTAATGTGTATAAAGCAAAAGACTTGGTTACAGGGAAGATAGTAGCATTGAAAAAAGTGAGATTTGATAATTTGGAGCCAGAGAGTGTGAAGTTTATGGCAAGAGAGATACTTGTTTTGAGGAAACTTGATCATCCAAATGTTGTAAAGCTTGAAGGATTGGTTACTTCTAGAATGTCATGTAGTCTTTATTTGGTATTTGAATATATGGAACATGATCTTGCTGGCCTTTCTGCTGGTCAAGGTGTTAAGTTCACTGAACCTCAGGTTAAATGCTTTATGAAGCAATTACTTTCTGGTCTTGAGCATTGCCACAGTCGAGGCGTATTGCATCGCGATATCAAGGGTTCAAATCTGCTTATTGATAATGAAGGAATCCTAAAAATTGCAGATTTTGGGCTGGCAACTTTCTATAATCCTAATAAAAAACAAAGCATGACAAGCAGAGTTGTGACACTTTGGTATCGACCCCCTGAGCTTCTTCTTGGAGCTACATTTTATGGCGTAGGTATTGACCTTTGGAGTGCCGGTTGCATTTTGGCAGAGCTGCTTGCCGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTGCACAAAATTTTTAAGTTGTGTGGCTCTCCAGCTGAGGAATATTGGCGGAAGCATAAATTGCCAAACGCTACAATCTTTAAGCCGCAACAGCCATATAAACGCTGTATCTCAGAAACATTCAAGGATTTTCCTCCATCTTCACTACCTCTAATTGACAGTCTTCTTGCAATAGATCCCGATCGCCGTGGAACTGCCTCAGCTGCCCTAAACCATGAATTTTTTACCACCGAGCCCTATGCTTGTGAACCGTCAAGTTTGCCAAAGTATCCTCCTAGCAAAGAATTGGATGTTAAAATGAGAGATGAAGAAGCTAGAAGGCAAAAGGCACTAAATGGAAAAGCTAATGCAGTCGATGGTGCCAAAAGAGTCAGAGCACGTGAGCGTGGTCGAGCCATTCCGGCCCCAGAAGCCAATGCAGAGATCCAAACAAATTTAGATAGGTGGAGAGTTGTGACCCATGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCACCTCATCAAGATGGAGCTGTTGGATATCCACAAGATGAATCAAGTAAAGGACCTGTTTCGTTTGGTGCCTCGGACACATCCTTTAGTTCAGGGACATTCAATGTAAAACCATCTGGACCTACTAGAAGCCATGATGGTACAGGACTTCACAAAGGTACAAAAACTAAAAAAGAAGAGTCTCAGATGGCTTCATCATGGAAATTTATGCGTCCATTTAAGCCATCAACTATTGGACTTTCAATGGATTTATTATTCAGGAGCAAATAA 1683 0.4379 MGCVLGTPASDGDRDQRRQRRTQQRNGSSEVTNNVVRVRERQKNRHTGDFPVNLPALERRKPMLDPLSVNQQGWPSWLMAVAGEAIGDWTPRRANSFEKLAKIGQGTYSNVYKAKDLVTGKIVALKKVRFDNLEPESVKFMAREILVLRKLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLSAGQGVKFTEPQVKCFMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYNPNKKQSMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPAEEYWRKHKLPNATIFKPQQPYKRCISETFKDFPPSSLPLIDSLLAIDPDRRGTASAALNHEFFTTEPYACEPSSLPKYPPSKELDVKMRDEEARRQKALNGKANAVDGAKRVRARERGRAIPAPEANAEIQTNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPQDESSKGPVSFGASDTSFSSGTFNVKPSGPTRSHDGTGLHKGTKTKKEESQMASSWKFMRPFKPSTIGLSMDLLFRSK* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3481 560 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
Mtr3g3481 560 SMART serkin_6 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3481 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mtr3g3481 560 PANTHER CELL DIVISION PROTEIN KINASE 58 541 - -
Mtr3g3481 560 MobiDBLite consensus disorder prediction 426 445 - -
Mtr3g3481 560 Pfam Protein kinase domain 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3481 560 MobiDBLite consensus disorder prediction 426 440 - -
Mtr3g3481 560 MobiDBLite consensus disorder prediction 519 535 - -
Mtr3g3481 560 MobiDBLite consensus disorder prediction 1 53 - -
Mtr3g3481 560 Gene3D Phosphorylase Kinase; domain 1 84 179 - -
Mtr3g3481 560 MobiDBLite consensus disorder prediction 463 537 - -
Mtr3g3481 560 Gene3D Transferase(Phosphotransferase) domain 1 180 421 - -
Mtr3g3481 560 ProSiteProfiles Protein kinase domain profile. 97 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3481 560 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 58 541 - -
Mtr3g3481 560 MobiDBLite consensus disorder prediction 489 513 - -
Mtr3g3481 560 SUPERFAMILY Protein kinase-like (PK-like) 91 386 IPR011009 -
Mtr3g3481 560 CDD STKc_CDK9_like 97 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3481 Mtr-Chr3 48699576 48704061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3481 89 415 Core Cell Cycle Gene Families AT5G10270 52.000 1.25e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mtr3g3481 Pkinase 3.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3481 K08819 - gmx:100807756 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3481 3 48699576 48704061 Mtr3g3481 3 48699576 48704061 ECH