Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3473 ATGTCAAAAGAGCAACAAGTATCCTCCTTTCAAAATAATCAAAACCAGGGTAAAGAGCATTCTGATTCTGAGGGATCATCACCTCTCACTGTTACTTCCCGGGTTTTGTGTATGTTGGGAGACATCACTGCTGGACCTGCTATTATGTTCACACAATGGCTTCAATCAGTTCGTAAACGAACTTCCAGTCATCGCTCCTCTGGATTTCCTCGCTCTTCTTCCACTCTCCCCTTTTGTCTTAGAGAATCTGCAGAGGATGCAAAAATTGATCAGCTTCCCGAGCAAACTGAAATTAGTTTGTGGGACAGGCTTGGTAAAGCTGAAATGTTGGACATTGAATCAAGTTCATTTTCTTGGGACATGCTCTCTTCACTTCACCACACTGAGCACGCCATCAGCAATGAACATTCTGAGGATGAAATGAATAGAGCTCTTGAGGTAACTGTAAATTCTGGAGGGGTTGTCTTCTTTGCCATTTTCAATGTTCAGGGAAGTGATGATGCTTCTCCAAAAGAAGCAGCAGCTGTCATAAAGATATCGTCATCAAGAATGGCTACACAGTCTGAACGCCTTGGATATGAATTTGCGAAGCGGTTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAGTTTGGAATGGCTCCAAATAAAGAAAGCTGCAGAAAAAGCAAGGGACTCAGCAAGTTCTGAGAGTGATATAATCGGTGAAACGACATGTTCCGAACTTTTGGAAGCACTTGAGCTTAGTCGGTGCCTCTTGTTTTTGAGTTATGTACACGGTTCACCTTTGCTTGAAAGCTCTAGCGCATTTGAATCACAGGATTCTGCAGAAAGAATATCAGCAGCTCTTGGCAGGGTAATGATGTTAGATCTTGTTATCAGAAATGAAGACAGGCTTCCATGCCGTCAACTTAGGTGGCGTGGGAACCCTGCAAATTTGTTATTGGCCGAAAAGACAATCTCTTCAAATTTAGATAAAATAGGAGATGCCTTTGATTTTGCAATGAACCGATATGGGTCCGGGGTGATTGGGACGCTTCAGAAAGAGAGGTCAATTTTAGTAGATAGCAGATTGAGTTCTCATAATTATGGAATAAGATCAAAAAGCTCTCATCTTACACAGATAAGAGAATCATCTGATGACATTTGCCTTAAAAGTCAAACATCAGGAGATTCAATGTTTACTGGCTCCAACATTGTGGCTATTGACTCTGGTGTTCCTCGTCGACCCCCAACTGGAAAACGTGCAGACGATCAGGTCAATTATCCTAAGTTGGTTGAGTTAGTACTAAATAGCTCTAAGTTTTCCTCTAACCTCTTACATGATATAACTGGAGGGAAGTTAGGAAGTGCTGATATACAAGGAAGTGACATAACATCAATAGTTCGTGAGTTCCGCAGTGGTTTTCGTGCTGCTCTCATGGATCTGCAAGGATTTCATGTATTCCTACATTCATTGCACAAAAAACTTGATGACTTGTTGCGATCATTTAATAGTACTATAAGCAAAATATCATCGGGGGAGTCTGAAAAAGAAGATTCACCTTCACCTGCTACTGGTAGTTGTCACTCTCCAACAAGTAAGGAGAAGTTTTCTAATGATAGCCATCGAGATTCTTGTGATTCAGATTCACAGAGATCTGTTCCAAGGGCATCACCATCTTCAGGCAATAGAGATTTTTGTGACTCTGCTTCTCCTATGTCAAGAGAAGGTTGTCATGGAAAATCCTCTAAAGGAAGTGTGGAGCCTTTGCTTGGTTCCCGCTTTACAGCTAAGCTCCGCGACTTTCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAACATTGGAATGAAATGCTTAAAAATGATGCTATCAACTTATGCCAGGAGAATAATTTCAATTCAGGATTTTTTGAGGGTAGTGATAGCAACACCGTTGTTGATGCATATGAATTGAAGGTCAGACTTGAGCATATCCTTGAAAGGATTGCATTGATATCTGAGGTTGAAAACACAGAGAGACCATCCGCTGTTACAAATAATTTGTTCATTGGTGGAGCACAATGTGCTCGATCTGTACACACAATGCAACACTTGGGAATCACTCATATTTTGTGTTTATGTGCTAACGAAATTGGACAATCAGATTCTCAATTTCCTGATCTATTTACTTACAAAAACTTCTCTGTATGTGACACTGAGAATTCCGACATCAGCATCCTATTTGATGAAGCTTGTGATTTTATAGAAGATGTTGAGAGAGCAGGTCAGAGAGTTTTAGTTCATTGCTTTGAAGGGAGAAGCAGAAGTGTCACTGTACTCCTTGCTTACTTGATGCTCAGAAAGAATTTCACATTATCAGTAGCATGGAATACTATGAGAAAAGCTCACAGCCGAGCGCAGCCTAATGATGGTTTTGCAAAGATCTTACAAGGACTTGATAAAAAACTGCATGGGAAGGTTTCAATGGAGTGGCAGCGGCGGAAACCAACGATGAAAACTTGTCCTATATGTGGCAAGAATGCTGGACTGAGCAGCGGCTCGCTTAAGATCCATCTTCAGAAGTCACATAAAAGGCTATCATCAGGGAGTGTTGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCAATTTGAATATTAGCCGTGGTGGGAGAGTCAGCCCCACTCAAAGGCAATCTCATTCAATGACAGATTAA 2703 0.4114 MSKEQQVSSFQNNQNQGKEHSDSEGSSPLTVTSRVLCMLGDITAGPAIMFTQWLQSVRKRTSSHRSSGFPRSSSTLPFCLRESAEDAKIDQLPEQTEISLWDRLGKAEMLDIESSSFSWDMLSSLHHTEHAISNEHSEDEMNRALEVTVNSGGVVFFAIFNVQGSDDASPKEAAAVIKISSSRMATQSERLGYEFAKRLGVQTPQARVIHNTSLEWLQIKKAAEKARDSASSESDIIGETTCSELLEALELSRCLLFLSYVHGSPLLESSSAFESQDSAERISAALGRVMMLDLVIRNEDRLPCRQLRWRGNPANLLLAEKTISSNLDKIGDAFDFAMNRYGSGVIGTLQKERSILVDSRLSSHNYGIRSKSSHLTQIRESSDDICLKSQTSGDSMFTGSNIVAIDSGVPRRPPTGKRADDQVNYPKLVELVLNSSKFSSNLLHDITGGKLGSADIQGSDITSIVREFRSGFRAALMDLQGFHVFLHSLHKKLDDLLRSFNSTISKISSGESEKEDSPSPATGSCHSPTSKEKFSNDSHRDSCDSDSQRSVPRASPSSGNRDFCDSASPMSREGCHGKSSKGSVEPLLGSRFTAKLRDFHKFAKVDAESYKELEHWNEMLKNDAINLCQENNFNSGFFEGSDSNTVVDAYELKVRLEHILERIALISEVENTERPSAVTNNLFIGGAQCARSVHTMQHLGITHILCLCANEIGQSDSQFPDLFTYKNFSVCDTENSDISILFDEACDFIEDVERAGQRVLVHCFEGRSRSVTVLLAYLMLRKNFTLSVAWNTMRKAHSRAQPNDGFAKILQGLDKKLHGKVSMEWQRRKPTMKTCPICGKNAGLSSGSLKIHLQKSHKRLSSGSVDSAMTMEIQKALTNLNISRGGRVSPTQRQSHSMTD* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3473 900 MobiDBLite consensus disorder prediction 881 900 - -
Mtr3g3473 900 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 743 795 IPR000387 GO:0016311|GO:0016791
Mtr3g3473 900 MobiDBLite consensus disorder prediction 507 531 - -
Mtr3g3473 900 CDD DSP 675 811 - -
Mtr3g3473 900 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 1 900 - -
Mtr3g3473 900 MobiDBLite consensus disorder prediction 532 547 - -
Mtr3g3473 900 ProSiteProfiles Dual specificity protein phosphatase domain profile. 674 819 IPR020422 GO:0006470|GO:0008138
Mtr3g3473 900 Gene3D - 265 508 IPR036940 GO:0016301
Mtr3g3473 900 MobiDBLite consensus disorder prediction 507 583 - -
Mtr3g3473 900 MobiDBLite consensus disorder prediction 1 28 - -
Mtr3g3473 900 Pfam Dual specificity phosphatase, catalytic domain 682 810 IPR000340 GO:0008138|GO:0016311
Mtr3g3473 900 Pfam Actin-fragmin kinase, catalytic 97 336 IPR015275 -
Mtr3g3473 900 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 900 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mtr3g3473 900 SUPERFAMILY Protein kinase-like (PK-like) 52 422 IPR011009 -
Mtr3g3473 900 Gene3D Protein tyrosine phosphatase superfamily 657 829 IPR029021 -
Mtr3g3473 900 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 674 819 IPR029021 -
Mtr3g3473 900 SMART dsp_5 674 816 IPR020422 GO:0006470|GO:0008138
Mtr3g3473 900 MobiDBLite consensus disorder prediction 548 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3473 Mtr-Chr3 48562831 48568833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3473 20 885 Protein tyrosine phosphatase (PTP) family AT5G23720 60.022 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3473 K14165 - gmx:102661225 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3473 3 48562831 48568833 Mtr3g3473 3 48562831 48568833 ECH