Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3471 ATGGGGATAGGTAGCACAGATGATACATTATTTAAATCTATGAATGAAACGTCCATGTCCAACAATGTTGTTAATTCTAATCTTCTAAACTATAATGTTTGCATTTCCACCCCGCCTAATATTCTCTCCCATGGCATATGGGGAAAACATGAGTCCGAAGGGAGTCCATTCAGGTCCTCTTTCCCAGTATTTCTTCATCAAGTCATTCTAATTTATGTCACAACAAGGGCTATCAATTTTCCTATCAAGCAGTTGGGTTTACCCAAGCTCATTTCACAAATGATGGCTGGGCTAATTTTAGGACCAGCAGTGCCAATATTTTTGGACCTCAAGAGGAATTTGTTTCCTTATGGGAGTCAAGACACACTTGCAACCATTGCAGGACTTGGTTATGTGTTGTTTCTGTTCGAAACAGGCGTGAAAATGGATTTCAACATGATCAGAAGGACAGGAAGAAAAGGATGGACGATTTCGCTTTTGGGGTTAGTAACCCCTATGCTCATTGGTTTATGTTTCTCTATCTGGGATCCAAAACATAGAAATGTTTTTAACAAAGAGTCCATTGAAAAAGGTATAATACTGCTAGGACACAATACAACTTCATTTGCAGTGATTGTGTCTCTCTTAAAAGACCTTAAACTTCTAAACTCTGAACTTGGAAGATTAGCATTATCTGTTGCTTTGGTTGGTGAGATATTGAGTAACATTTTTATAACTGTTACCTCAACTCTGCTTGATCAGGGTCATTATATTTCACCTGTCATGAGGTTGGGATATTTATTTGCCATCACTCTCTTCATTTTATTAATCTACCGTCCTGCAATGTTTTGGATTGTTGAACATACTCCTGAAGGAAAAGAAGTTAAGGATATTTACATCAACATTGTTATTGGGATTCTCTTTTGTTTGTGTTGGTTATCAGGAGAATTAGAAAAGGGTCCTGTTTTTTTACCATTCATTTTGGGATTGGCTACACCTGAAGGACCTCCATTAGGATCTACATTGATTAAAAGGGTTCATTTGTTAGGCATTAAATTGTTTTTGCCAATTTACATGACTACAAGCACAATGAAGGTAGAATATGGATTTTGGAGATCATCATATTCAGGATCAACACTTGAGACTTCTTTGTTTGTTTTATTTACTGGTTATTTTTTAAAAATGGTAGCATGCTTTCTATCTTCACTCATTTTCAACATGCCTTTAAAGGATGGTATCTCCCTTGCCCTACTTTTGAACTGCAAAGGTGTTGTGGAAGTAAACATGTACTCTACCGCATTGGATAGAAATGATATCCGTCCGAAAATATATTGTGTGGTTATATTCATAATCATGGTTTCAATTTGCTCGACTCACTTGTTGGTAAAACATTTGTATGATCCTTCAAGGAAATATGCTGGCTACCAAAAGAGGAACATATTCAGTTTGAAACCCGACTCAGAACTGAAGATACTAGTTTGCATTCATAAACCACACCACATAACTCCTATGACTGAAGTAATTGATCTATGTGACCCTATAGTAGAATATCCTGTCACCGTAGATGCCTTGCATTTAATCGAGTTAGCCGGAAGGGCTTCACCCATTTTCATTTCTCACAAAAAGAAGAAAGTTGTTTCTTTAAACTTGCATGACTCATACTCTGATAATGTTGTTTTAAGTCTCAAACTATACGAGAGTGATAAACAAGGCGCAGCAATAGTAAACCCATATACTGCTATATCTCCACTTAACTTAATGCATGAAGATGTTTGTCACCTAGCATTGGATAAAGTTTCATCAATTATATTTCTTCCTTTTCATAAAAAATGGTCAAGTGATGGAAAGCTTGAATATGATGACAAGAACATAAGGTCTTTAAACCGCAACATCTTGGAAAAATCTCCATGCTCGGTTGGAATCTTAGTGACTCGCTTTGTTCATCAAACAGATTCATCGCTTCGATTAGCCTTGGTATTTTTGGGTGGGAGAGATGATAGAGAAGCTTTATATTTGGCGAAGCGAGCAGCAAGGGTTTCAAGCATTGAGCTAGTGATATATCATATTGTAGACAAGAACAAAAGTGATAAGGACCAAGAGAGTATGGATGCAGTGCTTGATAAAGCAGTGTTAAAAGATGTTTATGTAGAACATTGTAGAATGGAAAATGTAACATTTAGAGAAATAAAAGTGGAGGATGGATCACAAACACTTGATGTTCTTCGAGGAATGGTTAAAGAACATAATTTTATAATAGTTGGGAGAAGAAATGGCGTCAACTCTCCTCAGACATATGGACTTCAACATTGGAGTGAGTTTCCTGAGTTGGGTCCTGTTGGAGATTATTTGGCTTCCTCGGATCTTGGTTGCAAATCATCAATTTTAGTGGTGCAGCAACAACAACAAATATGCACATAG 2397 0.3684 MGIGSTDDTLFKSMNETSMSNNVVNSNLLNYNVCISTPPNILSHGIWGKHESEGSPFRSSFPVFLHQVILIYVTTRAINFPIKQLGLPKLISQMMAGLILGPAVPIFLDLKRNLFPYGSQDTLATIAGLGYVLFLFETGVKMDFNMIRRTGRKGWTISLLGLVTPMLIGLCFSIWDPKHRNVFNKESIEKGIILLGHNTTSFAVIVSLLKDLKLLNSELGRLALSVALVGEILSNIFITVTSTLLDQGHYISPVMRLGYLFAITLFILLIYRPAMFWIVEHTPEGKEVKDIYINIVIGILFCLCWLSGELEKGPVFLPFILGLATPEGPPLGSTLIKRVHLLGIKLFLPIYMTTSTMKVEYGFWRSSYSGSTLETSLFVLFTGYFLKMVACFLSSLIFNMPLKDGISLALLLNCKGVVEVNMYSTALDRNDIRPKIYCVVIFIIMVSICSTHLLVKHLYDPSRKYAGYQKRNIFSLKPDSELKILVCIHKPHHITPMTEVIDLCDPIVEYPVTVDALHLIELAGRASPIFISHKKKKVVSLNLHDSYSDNVVLSLKLYESDKQGAAIVNPYTAISPLNLMHEDVCHLALDKVSSIIFLPFHKKWSSDGKLEYDDKNIRSLNRNILEKSPCSVGILVTRFVHQTDSSLRLALVFLGGRDDREALYLAKRAARVSSIELVIYHIVDKNKSDKDQESMDAVLDKAVLKDVYVEHCRMENVTFREIKVEDGSQTLDVLRGMVKEHNFIIVGRRNGVNSPQTYGLQHWSEFPELGPVGDYLASSDLGCKSSILVVQQQQQICT* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3471 798 Pfam Sodium/hydrogen exchanger family 69 450 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr3g3471 798 PANTHER CATION/H + ANTIPORTER 18 796 - -
Mtr3g3471 798 Gene3D - 63 466 IPR038770 -
Mtr3g3471 798 PANTHER CATION/H+ EXCHANGER 3 18 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3471 Mtr-Chr3 48550983 48554062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3471 33 794 Antiporter Super Family AT5G22900 33.869 2.61e-152 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3471 - - mtr:MTR_3g498715 1549.64