Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3463 ATGGATAGAAGGAGAGAATCATGGGAAGAAGAGGGAAAAGAAGATGAGAATTTGTTTCCAGTGTTTTCTGAAAGGTCCCAACAAGATATGTCTGCCATAGTATCTGCTCTTACACAAGTCATGGGCGGCAACAATAACAATGAAATGCATGAAGCTTCATCAATCCATAATATTGAACAATCTCAGCCACCACAGCAAGATCAAGGGAATGTAAGACGAAGACACTATAGAGGTGTGAGGCAGAGGCCATGGGGAAAGTGGGCTGCAGAGATTCGTGATCCGAAGAAGGCGGCAAGGGTATGGCTAGGAACATTTGAAACGGCTGAGGCTGCAGCCGTTGCATATGATGAAGCTGCACTCAGATTCAAAGGAAGCAAAGCTAAGCTCAATTTTCCTGAAAGAGTTCAAAGTGCAACAGAATTTGGATATAACCAACAATTTCATCACCTAGTGTCTACTACAAGTAACGAGCAACAATCCAATCCAGTTCCTCTTCAACACTTTTCTCGAGAAACATATTCAAATCCTTATCAGTATGCTGCACAAGCACATCTTCAAGCTAGTGGAAGTAGCAACTTCAATCAGGATATGCTTAGTTTCTATGGGAGAGACATGTTTGTTTCTAATTCTCAACCTTTATCAACTACATCTCCGTCTTCATCCTCATCTTCTGGACTATCTCAGCAGCAACAAGAGCTTCTGAGATTGTCAATGCAATATGGAGGTTCTTCTTCCTCTTCTGACCCTTCAATGAATTGGAGGGATGACATGGATAGAAGACAATGA 786 0.4198 MDRRRESWEEEGKEDENLFPVFSERSQQDMSAIVSALTQVMGGNNNNEMHEASSIHNIEQSQPPQQDQGNVRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAVAYDEAALRFKGSKAKLNFPERVQSATEFGYNQQFHHLVSTTSNEQQSNPVPLQHFSRETYSNPYQYAAQAHLQASGSSNFNQDMLSFYGRDMFVSNSQPLSTTSPSSSSSSGLSQQQQELLRLSMQYGGSSSSSDPSMNWRDDMDRRQ* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3463 261 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Mtr3g3463 261 MobiDBLite consensus disorder prediction 1 20 - -
Mtr3g3463 261 MobiDBLite consensus disorder prediction 210 261 - -
Mtr3g3463 261 MobiDBLite consensus disorder prediction 210 251 - -
Mtr3g3463 261 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Mtr3g3463 261 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Mtr3g3463 261 PANTHER DNA-BINDING DOMAIN 23 243 IPR044808 GO:0003700|GO:0009873
Mtr3g3463 261 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Mtr3g3463 261 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Mtr3g3463 261 MobiDBLite consensus disorder prediction 57 77 - -
Mtr3g3463 261 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Mtr3g3463 261 MobiDBLite consensus disorder prediction 1 21 - -
Mtr3g3463 261 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
Mtr3g3463 261 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 23 243 - -
Mtr3g3463 261 CDD AP2 75 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3463 Mtr-Chr3 48458630 48460781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3463 17 143 AP2-EREBP Transcription Factor Family AT5G61890 66.667 1.92e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr3g3463 AP2 4.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3463 - - gmx:100787091 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3463 3 48458630 48460781 Mtr3g3463 3 48458630 48460781 ECH