Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3429 ATGGATAGGTGGGGTGTTCATCGTCAACAGACATTCATTGGTTGGCGTGCAAGTTCTTTTCCTTCTGTTACTAGGAAGGAAGAGGACTCGGACAACGACAGAGAAGAAGTAAATGTTAAGGATGAACCAATATATTTTCCAGATAGTAAGAAAAGGAAGCGCCTCAGCCTTAGTCAGCTTAGAGAGGTGAAAGTAGAGTCTTGTGAGAAGCTTAGAGAGGTGAAAGAGGAGCCTTATGGTCAGCTTATTGAGGTGAAAGAGGAGTATGCTGGGAATCAAAGCAGTAGCAAGAATAAGAGAAAGAAGCATGATAGTAAGGACAGATGGTCAAGCGAGAGGTACAAGTTGGCTGAGCAAAGCATGTGGGAGGTGTTGAAGGCTGAGGGGGCGACTTTTGAACACCCAATAACCCGACCTGTACTAAGATCAGCTGCCCGTAAATTCATCGGTGATACTGGACTTTTAGACCACTTACTGAAGCACATTGACCGTAAAGTGGCACCTGGGGGGACCGATCGGTTCCGAAGATGGTTCAACCCCGACGGAATTATGGAGTATTGGTTGGAGAGGGCTGACTTGGTTGACGTCCGCGAGGAGGCTGGGGTTGATGACCCCTATTGGATACCACCATCCACTGTTAGGGCCATCCATGCCCCTTGTCAGGATGCTGATTCTTCTGCTGAATTGAAACTGCTTAAAATAGAAATGGCCCAAATGAAGAAAGATATGCAGGAGCTCATTGCCCAGAAGGAAAAGAAAACTGAAAGTAACATGATGGAGAAGACTTGCAAGGAACTTATGAAGTGGAAAGCTAAAACTGACTACCGCCTAACTGAAATCATGGATTCTTTGAAGAATTTGCAGGGCAAGTATGGCGAGTTCGTGATATGGAAAACTGAAGTGGAGCAAAACCTTATGGATATAACAAATAAATTGAATGCTCTTCAAGCACCAAGAGATTGCACAACTTTTAGTCCTTCAGAAAAATGGAAAGATTGGTTAGAAAACACTAACCCGGACAATATTCAGGATGACGGATTGGCAACTTGGATAGGGAGTTCAGAACTATTTAATGTTCCACAAGAGTGTTTTCTTGAAGATCCCTACTCAGGCATGCCAGTTCAGCCACTCAATGAAGAGCTGACTAACAAGAAGAGTCATGTTGAGGAGCTGATACCCACAATGCAAGAGGATCAACCTAATGTCACCCCAGATTCTTCTACAACTGTTAATTCAAAGGCAGACGTTGACAACTCGTTGATAATGTTTCAGGAGATGTTTATGGATTTATTCAAATGGAAAGAAAAGATGGAGCAGCAGCTGTTGGATGTATCAAACACTGTATATGGCATGCTAGCAATGAAGTAG 1368 0.4364 MDRWGVHRQQTFIGWRASSFPSVTRKEEDSDNDREEVNVKDEPIYFPDSKKRKRLSLSQLREVKVESCEKLREVKEEPYGQLIEVKEEYAGNQSSSKNKRKKHDSKDRWSSERYKLAEQSMWEVLKAEGATFEHPITRPVLRSAARKFIGDTGLLDHLLKHIDRKVAPGGTDRFRRWFNPDGIMEYWLERADLVDVREEAGVDDPYWIPPSTVRAIHAPCQDADSSAELKLLKIEMAQMKKDMQELIAQKEKKTESNMMEKTCKELMKWKAKTDYRLTEIMDSLKNLQGKYGEFVIWKTEVEQNLMDITNKLNALQAPRDCTTFSPSEKWKDWLENTNPDNIQDDGLATWIGSSELFNVPQECFLEDPYSGMPVQPLNEELTNKKSHVEELIPTMQEDQPNVTPDSSTTVNSKADVDNSLIMFQEMFMDLFKWKEKMEQQLLDVSNTVYGMLAMK* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3429 455 Coils Coil 57 77 - -
Mtr3g3429 455 MobiDBLite consensus disorder prediction 93 112 - -
Mtr3g3429 455 Coils Coil 229 256 - -
Mtr3g3429 455 MobiDBLite consensus disorder prediction 88 112 - -
Mtr3g3429 455 PANTHER PROTEIN DYAD 3 454 IPR044221 GO:0007131|GO:0051177|GO:0051321
Mtr3g3429 455 MobiDBLite consensus disorder prediction 21 42 - -
Mtr3g3429 455 PANTHER DYAD PROTEIN 3 454 - -
Mtr3g3429 455 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3429 Mtr-Chr3 48175740 48179193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3429 94 189 PHD Transcription Factor Family AT5G22260 39.796 4.84e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3429 - - gmx:100806484 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3429 3 48175740 48179193 Mtr3g3429 3 48175740 48179193 ECH