Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3428 ATGTCGACTTTTCACGTCGGCGGTAAGGTCGTAGACAAAGTTGATCTACTCCGGAAGAAGCAATTGCCATGGCGCTTAGACGTTTTTCCTTTCGCTATTTTATACGGCGCGTGGATTTCAGTCATTCTTCCTAGTCTCGATTTCATCGATGCTTGTATTGTTTTAGGTGCACTCGCTTCTCTTCATATTCTCGTTTGTCTTTTCACTGCTTGGTCCGTTGATTTCAAATGCTTTGCGTATTACAGCAAGGTTAAGAATATTGATCAGGCTGATTCATGCAAGATAACTCCGGCGAAATTTTGTGGTTCAAAAGAAGTTGTGCCCCTTAATTCGCGGAAATCGTCTGCAGGTTCTTCATTAGCTGTGGATTTGGAAGAAATTTATTTTGATTTTAGAAAACAATGTTTCGTTTATTCGAAGGAGAAGGGGACCTTTTGCAAACTTTCTTACCCTACCAAGGAAACATTTGGATATTATGTCAAGAGTAGCGGTCATGGCTCCGAAGCCAAAGTTCTTGCTGCTACTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCACTGCATGGAACCTTTTTTTGTTTTTCAGGTTTTCTGCGTTGGTCTTTGGTGTTTGGATGAATATTGGTACTATAGTTTGTTCACTCTAGGTATGCTGTTTATGTTTGAGTCAACAATGGCAAAAAGTCGGTTGAGGACTCTGACTGAGTTAAGACGTGTTAGAGTGGATAATCAGATCGTAATGGTACATCGTTGTGGCAAGTGGGTAAAAATTTCTGGTACAGACCTTTTGCCTGGAGATGTTGTCTCTATAGGTCGCTCTGCTGGTCAGAATGGAGAGGAGAAATCTGTACCTGCAGACATGCTTATATTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGATTTCTATTGCGGGTAGGCATATTGAGGAGAAGTTGTCAGCAAAGCGAGATAAAACCCATGTTTTATTTGGTGGAACTAAAATATTACAGCATTCTCCAGATAAGACCTTTCCTCTAAAAACCCCTGATGGTGGCTGCTTGGCTGTTGTTCTGAGAACGGGATTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCCACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTATTCGCTTTAATTGCGGCTGGTTATGTGCTTATTAAGGGGCTAGAAGACCCCACAAGGAGCAAGTATAAACTTATACTAAGTTGTTCTCTTATTGTTACTTCTGTGATACCTCCCGAGTTGCCAATGGAATTATCAATAGCTGTTAATACTTCTCTGATTGCACTGGCACGCCGTGGAATTTTTTGCACAGAACCTTTTCGGATACCATTTGCTGGGAAGGTTGATATATGTTGCTTTGACAAGACTGGGACACTTACATCTGATGACATGGAATTTTCTGGAGTTGTTGGGTTGGCAGAAACTACAGATTTGGAATCTGACATGAGTAAAGTGCCTGTGCGAACAGTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGCGATCCTCTTGAGAAGGCCGCACTTAAGGGAATCGATTGGAGTTATAAATCTGATGAGAAGGCCGTTCCTAAAAGGGGAAGTGGCCATCCTGTCCAAATTGTTCAGCGATACCATTTTGCATCTCACTTAAAACGGATGGCAGTCATTGTTCGTATTCAGGAGGAATTTTTTGCATTTGTGAAGGGTGCCCCAGAAATTATACAAGATAGGCTCATTAATGTGCCTCCATCATATGTTGAGACCTACAAAAGATATACACGTCAGGGTTCTCGTGTTCTAGCTCTGGCTCACAAGTCTCTTTCTGATATGACAGTCAGTGAAGCTAGAAGCTTGGATAGGGATATGGTGGAGAGTGGGCTTACCTTTGCTGGTTTTGTGGTGTTTAATTGTCCCATAAGGTCAGATTCAGCTGCTGTTTTATCTGGATTGAAAGAATCTTCACATGACTTGGTAATGATTACTGGTGATCAAGCTTTGACAGCCTGTCATGTTGCTAGCCAAGTTCATATTATATCAAAACCAACATTAATCCTTAGTCCAGCAAGTAATGGTGAAGGATACAATTGGGTGTCCCCTGATGAGAATGAAAACATTCGCTACAGTGGGAAAGAGGTAGAATCTTTATCAGAGACTCATGATCTATGTGTTGGAGGTGATAGCTTTGAGATGTTGCAACAGACATCAGCTCATCTTCTGGTCATTCCTTATGTGAAGGTTTTTGCTAGAGTTGCTCCTGAGCAAAAGGAACTTATCTTGACCACTTTCAAAACAGTGGGGCGGGTAACATTGATGTGTGGGGATGGAACCAATGACGTTGGAGCTTTGAAGCAGGCCCATGTAGGAGTTGCTCTTCTTAATGCAATCCCTCCAACTCAAGGTGGAAACCCCCCTTCAGATTCATCTGGGGAAGACGGTACAAAATCTGCTAAGCAAAAGAAATCTAAGCTTGCGCTGGAAACATCTGCAAAGACGGTTAGTCCAACTGGAGAAGGCACTTCAAGAGCCAGAGTTGCTTCAAAATCAGACTCTACCAGCAATTCATCTGTTAACCGTCATCAAACAGCCGCTGAGTTGCAAAGACAGAAACTTAAGAAGATGATGGATGAGCTTAATGAGGATGGAGATGGCCGTGCACCCATTGTCAAGCTCGGTGATGCCTCAATGGCATCCCCATTCACTGCTAAGCATGCATCTGTTTCTCCCACCACTGACATAATTCGACAAGGTCGGAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTGGGCCTCAACTGCCTTGCTACTGCATATGTGTTAAGTGTTATGTATCTGGACGGTGTCAAGCTTGGTGATGTACAAGCCACAATAAGTGGTGTCTTTACTGCTGCATTTTTCCTCTTCATTTCACATGCACGCCCTCTTCCCACTCTCTCATCTGAACGTCCCCACCCCAACATTTTCTGTGCTTATGTCTTGCTTTCCCTCTTGGGACAATTTTCAGTTCACCTGTTTTTTCTAATATCATCCGTCAAAGAAGCTGAGAAATACATGCCAGATGAATGTATTGAACCAGATGCAAGTTTTCATCCCAACCTGGTTAATACTGTTTCCTACATGGTGAGCATGATGCTCCAGGTTGCTACATTTGCCGTAAACTATATGGGCCATCCTTTCAACCAAAGTATATCTGAAAACAGGCCATTCCGGTACGCCCTCATTGCTGCTGCCGGTTTCTTTACTGTGATAACATCTGATCTCTTCAGGGATTTGAATGACTGGTTGAAGTTAGTGCCATTGCCAGTGGGGTTGAGGGATAAACTGTTGCTTTGGGCTTTTCTAATGTTTTTCGTATGCTACGCATGGGAGAGACTATTGAGGTGGGCTTTTCCTGGTAAAGTCCCAGCTTGGAAGAGGCGGCAACAGGTTGCCGTATCTAATTTAGAAAAGAAGAAACAGTAG 3576 0.4279 MSTFHVGGKVVDKVDLLRKKQLPWRLDVFPFAILYGAWISVILPSLDFIDACIVLGALASLHILVCLFTAWSVDFKCFAYYSKVKNIDQADSCKITPAKFCGSKEVVPLNSRKSSAGSSLAVDLEEIYFDFRKQCFVYSKEKGTFCKLSYPTKETFGYYVKSSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLGMLFMFESTMAKSRLRTLTELRRVRVDNQIVMVHRCGKWVKISGTDLLPGDVVSIGRSAGQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKISIAGRHIEEKLSAKRDKTHVLFGGTKILQHSPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLIKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLAETTDLESDMSKVPVRTVEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDEKAVPKRGSGHPVQIVQRYHFASHLKRMAVIVRIQEEFFAFVKGAPEIIQDRLINVPPSYVETYKRYTRQGSRVLALAHKSLSDMTVSEARSLDRDMVESGLTFAGFVVFNCPIRSDSAAVLSGLKESSHDLVMITGDQALTACHVASQVHIISKPTLILSPASNGEGYNWVSPDENENIRYSGKEVESLSETHDLCVGGDSFEMLQQTSAHLLVIPYVKVFARVAPEQKELILTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAIPPTQGGNPPSDSSGEDGTKSAKQKKSKLALETSAKTVSPTGEGTSRARVASKSDSTSNSSVNRHQTAAELQRQKLKKMMDELNEDGDGRAPIVKLGDASMASPFTAKHASVSPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSSERPHPNIFCAYVLLSLLGQFSVHLFFLISSVKEAEKYMPDECIEPDASFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENRPFRYALIAAAGFFTVITSDLFRDLNDWLKLVPLPVGLRDKLLLWAFLMFFVCYAWERLLRWAFPGKVPAWKRRQQVAVSNLEKKKQ* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3428 1191 SFLD p-type atpase 469 955 IPR044492 -
Mtr3g3428 1191 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Mtr3g3428 1191 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Mtr3g3428 1191 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Mtr3g3428 1191 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Mtr3g3428 1191 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Mtr3g3428 1191 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Mtr3g3428 1191 Gene3D - 224 388 - -
Mtr3g3428 1191 SUPERFAMILY HAD-like 483 834 IPR036412 -
Mtr3g3428 1191 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 513 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mtr3g3428 1191 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Mtr3g3428 1191 Gene3D - 483 668 IPR023299 GO:0000166
Mtr3g3428 1191 Coils Coil 893 917 - -
Mtr3g3428 1191 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1169 IPR023298 -
Mtr3g3428 1191 MobiDBLite consensus disorder prediction 862 900 - -
Mtr3g3428 1191 Pfam E1-E2 ATPase 256 468 - -
Mtr3g3428 1191 Gene3D - 669 834 IPR023214 -
Mtr3g3428 1191 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Mtr3g3428 1191 SFLD Haloacid Dehalogenase 469 955 - -
Mtr3g3428 1191 PANTHER CATION-TRANSPORTING ATPASE 1 1183 - -
Mtr3g3428 1191 SUPERFAMILY Calcium ATPase, transduction domain A 255 387 IPR008250 -
Mtr3g3428 1191 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 42 1149 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Mtr3g3428 1191 MobiDBLite consensus disorder prediction 831 900 - -
Mtr3g3428 1191 CDD P-type_ATPase_cation 170 1107 - -
Mtr3g3428 1191 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1183 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3428 1 1191 Primary Pumps ATPases AT5G23630 78.057 0.0 1923
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3428 K14950 - gmx:100789385 2139.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3428 3 48160520 48174160 Mtr3g3428 3 48160520 48174160 ECH