Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3421 ATGCTTTTATCTGACAAGTCATGCACGCTTAAAACCATCTATAAAAAGATAACCTCAATTTCACTGATTGTAGAGAAGAAAACAGCTTCAAGAGAAGTGGCGATGCATGCAGAAGCAAGAATGTGTGAGTCACAGAGCCATGGATTCAAAGGTGCATGTGTAGGTGACCACAACTGTGCACTTGTTTGCAGAAACGAAGGGTTCTCCGGTGGCAGATGCCAGGGCTTGCGCCATCGTTGCTTTTGCACCAGGCTTTGTTGA 261 0.4521 MLLSDKSCTLKTIYKKITSISLIVEKKTASREVAMHAEARMCESQSHGFKGACVGDHNCALVCRNEGFSGGRCQGLRHRCFCTRLC* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3421 86 Gene3D - 40 86 IPR036574 -
Mtr3g3421 86 PANTHER DEFENSIN-LIKE PROTEIN 27 86 - -
Mtr3g3421 86 ProSitePatterns Gamma-thionins family signature. 40 63 IPR008176 GO:0006952
Mtr3g3421 86 PANTHER DEFENSIN-LIKE PROTEIN 1 27 86 - -
Mtr3g3421 86 SMART gth_4 41 86 IPR003614 GO:0006952
Mtr3g3421 86 CDD Knot1 51 83 IPR003614 GO:0006952
Mtr3g3421 86 SUPERFAMILY Scorpion toxin-like 40 86 IPR036574 -
Mtr3g3421 86 Pfam Gamma-thionin family 40 86 - -
Mtr3g3421 86 PRINTS Purothionin signature 41 56 IPR008176 GO:0006952
Mtr3g3421 86 PRINTS Purothionin signature 71 85 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3421 Mtr-Chr3 48094528 48095417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3421 10 86 Plant Defensins Gene Families AT2G02130 49.351 7.23e-21 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3421 - - mtr:MTR_3g097370 122.094