Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3419 ATGGACAAGTACGAGGCTGTTAAAGATTTAGGTTCCGGTAATTTTGGGGTTGCTAAGCTTATGAGGAACAAAGTTACAAAGGAACTTGTCGCCATGAAATACATCGAGCGTGGCTCAAAGATTGATGAGAACGTGGCAAGAGAGATCATGAATCATAGGTCACTTCGGCATCCGAATATAATTCGTTTCAAGGAGGTGGTTTTGACTCCAACACATTTAGCAATTGTGATGGAGTATGCAGCTGGAGGAGAACTCTTTGAGAGGATATGCAATGCTGGCAGGTTCAGTGAAGATGAGGCCAGATATTTCTTTCAGCAGCTGATCTCAGGTGTTCATTTCTGTCACACCATGCAAATATGCCATAGAGATCTGAAGCTAGAGAATACCCTTTTAGATGGAAGTCCTGCACCCCGCTTAAAAATTTGTGACTTTGGTTATTCGAAGTCGTCTTTGCTCCATTCACGACCCAAATCAACTGTTGGAACACCGGCATATATAGCACCCGAGGTTCTTTCTAGGCGGGAGTATGATGGAAAGATGGCTGATGTCTGGTCATGCGGCGTGACTCTCTATGTCATGTTGGTCGGAGCATATCCCTTTGAGGACCAGGATGACCCCAAAAATTTTAGGAAAACAATTCAGCGTATAATGGCCATTCAATACAAAATTCCTGATTATGTTCACATATCTCAAGATTGCAGACACCTCATCTCTCGTATATTTGTTGCAAATCCATTGAGGAGAATTACTATTAAGGAAATCAAGAGCCATCCATGGTTTTTAAAGAATCTTCCAAGGGAGCTAACAGAGTCAGCTCAAGCTATGTATTACCAGAGAGAAAATCCAAGCTTTCATCTACAAAGTGTGGACGATGTAATGAAAATTGTGGGAGAGGCAAGAAACCCGCCTCCAGTATCTAGGCCCGTCAAAGGTTTTGGCTGGGAAGGGGAAGAAGTTGAAGGAGAAGAAGATTTGGAAGAAGAATTGGAGGAAGAGGTAGTCGAAGAAGATGAGTACGATAAGAGGGTCAAAGAGGTACATGCAAGTGGAGAATTCCATATAAGTTAA 1068 0.426 MDKYEAVKDLGSGNFGVAKLMRNKVTKELVAMKYIERGSKIDENVAREIMNHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKMADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTIQRIMAIQYKIPDYVHISQDCRHLISRIFVANPLRRITIKEIKSHPWFLKNLPRELTESAQAMYYQRENPSFHLQSVDDVMKIVGEARNPPPVSRPVKGFGWEGEEVEGEEDLEEELEEEVVEEDEYDKRVKEVHASGEFHIS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3419 355 PANTHER SERINE/THREONINE KINASE 2 348 - -
Mtr3g3419 355 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Mtr3g3419 355 Coils Coil 322 342 - -
Mtr3g3419 355 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 348 - -
Mtr3g3419 355 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mtr3g3419 355 MobiDBLite consensus disorder prediction 317 336 - -
Mtr3g3419 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Mtr3g3419 355 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3419 355 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Mtr3g3419 355 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3419 355 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3419 355 MobiDBLite consensus disorder prediction 306 355 - -
Mtr3g3419 355 SUPERFAMILY Protein kinase-like (PK-like) 1 295 IPR011009 -
Mtr3g3419 355 MobiDBLite consensus disorder prediction 337 355 - -
Mtr3g3419 355 CDD STKc_SnRK2 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3419 Mtr-Chr3 48075848 48079416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3419 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 43.333 3.46e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mtr3g3419 Pkinase 7.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3419 K14498 - gmx:547811 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3419 3 48075848 48079416 Mtr3g3419 3 48075848 48079416 ECH
Mtr8g3348 8 44011464 44014604 Mtr3g3419 3 48075848 48079416 PCT