Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3406 ATGCAGGAGGATAAGAAGATGAAAGTGAAGAAGGGATGGCTTGCAGTTCAAGTGGGTTTAGAGGAGGAAGAAGAAGGTGGTTCTTGCGCTCAGAAATTTGTCATACCTATCTCTTATCTTTACCATCCACTTTTCAAGCGTCTTCTCGACCAAGCTTATGATGTTTATGGCTACCATACCAATGGTCCTCTCAAGCTTCCATGTTCTGTGGATGATTTCCTTCATCTTCGATGGCGAATTGAGAAAGAATCTCCTAACCAACATAACCATAACCACCATCAGCATCGTCTTCCTCATGCTCTGATTTTCCACTCTTGTTGA 321 0.4268 MQEDKKMKVKKGWLAVQVGLEEEEEGGSCAQKFVIPISYLYHPLFKRLLDQAYDVYGYHTNGPLKLPCSVDDFLHLRWRIEKESPNQHNHNHHQHRLPHALIFHSC* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3406 106 PANTHER SMALL AUXIN-UP RNA-RELATED 7 95 - -
Mtr3g3406 106 Pfam Auxin responsive protein 6 79 IPR003676 GO:0009733
Mtr3g3406 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3406 Mtr-Chr3 47947021 47947725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3406 9 81 Calmodulin-binding Proteins AT3G43120 42.466 3.57e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3406 - K14488 mtr:MTR_3g097120 212.616