Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3373 ATGAAGTTAATCGGCGACGGAGACGGTGGCCGGAAAGTGTTGGTCGGAGTTAAATTAGATCCCAGGAGCCGTGAATTGCTCACTTGGGCTCTCGTTAAGGTTGCCGAGCCTGGTGACCTTGTTATCGCTCTCCACGTTCTCGACACCGTAACTGAGGGAACATCGTCGTTGTTATCGTTGGTGAAGACTTTGGATTCGGTTCTCGCAGTATACGAAGGATTCTGTAATTTAAAACAGGTTGATCTTAAATTGAAAGTGTGTAGAGGTGATTCGGTTCGGAAGCTTCTAGTACAAGAGGCCAAAGCGTTAGGAGTTTCAACGGTTATTTTAGGAACTTCCAAATCTCATCACACAATTCGTTCTTCTGCATGGGTTGCTAAGTATTGTGCGAAGAAATTGCATAAATGTGTTTCTGTTTTCGCAGTTGATAATGGCAAAATTGCTTTCCAAAGAGAAGCTACTGCTCAAGAAAAATTACAGTGGTCCTATTTGATTTTTACGAATAAAAGTGTGAAGGATTGTGGAAGTTGTGCTCTGGGTGAGATTTCTGAAACCGAATTTAATCAAGGAGAGTTGCTTGATTATTGTGAAACAGAAAATCCGCTTGCTTTGGTACCATTTCAAAAACATGATGATGAATCTGTGGTTGGTGATGAATCCCTAGTTGGTGATTCGAAACGGATGAAACCTGGTTGGTCACTCATTCGCAACGTATTTCATTCCAAAAGGCATACCACCAAGTCTTCGCCGAAAAGTACATTTGTTTTTCAACGGGGAGTGCGACATTCCACCAGTCATTCTTCATCTGTAGTCTATCCAGATCATAAACAAATTAATATTGATCCAATTGATGATTCTACCCTGGATGGGGAGAGTGGTGCCATTGTACCATACGGATCTGCCATTATATTACCTCCTCCCACCCTTTGCAGTGACGCCGATAGCCTTTCCGAAGAATTGTTGATCTTACGAGATAAATACTCATCTTCCTGTAGACTCTATAGTTTGCAGGAACTTGTAGCTGCAACTGTAAACTTCTCATCTGAAAATTTGGTTGGCAAAGGTGGTAGCAGTGTTGTTTACCGAGGATGTCTTTCCGATGGTAAAGAATTGGCGGTGAAAATTTTGAAGCCGTCAGAGAATGTTTTAAAAGAGTTTGCTCAGGAAGTTGAGATTGTTACAACTTTGAATCACAATAACATAATATCTCTATCTGGTTTTTGTTTAGAGGGAAACCATTTATTATTGGTATATGATTTTTTATCAAGAGGAAGCCTAGAAGAAAACCTTCACGGTAATAAAAAGGACTATAATTCATTTGGCTGGCAAGAGAGGTACCGGGTGGCTGTGGGTGTAGCCGAGGCCTTGGATTATCTGCATAACGGCTGTGCTCAATCTGTAATCCATAGGGATGTCAAATCGTCTAATATCCTTCTTTCAGATGATTTTGAGGCTCAGCTCTCAGATTTTGGACTGGCTAGTTGGGGTTCTTCTTCTTCCCAAATTATTTGTACTGATGTTGCTGGAACTTTTGGGTACCTAGCTCCGGAGTACTTCATGCACGGTAGAGTAACTGACAAAATTGATGTATATGCTTTTGGGGTTGTACTCCTTGAGCTTCTATCCAATAGGAAGCCCATTAACAATGAACGCCCAAAGGGCCACGAGAGCCTTGTTATGTGGGCAACATCAGTCTTGAAAAGTGGAAAGATTTCCCAGTTGCTTGACCCAAGCCTTGGCAGTGAATACAACAATTGCCAGATCAAGAGAATGGTTTTGGCTGCTACTCTTTGTATTAGACGAGTTCCTAGATTGCGACCTCAAATTGGAGTTATACTGAAACTTCTTCACGGTGATGAAGAAGTAACAAGATGGGCAGAACAAGAAGTTTGTGCACCAGAAACACATGATGGATTTGATGAGGAACTATTTCCAACAAATATTCAGTCCCACCTTAACCTTGCACTGCTGGACTTGGAGGATGATGCAGTTTCTATCTGTAGCACTGAGCAGTGTGTCTCGTTGGAAGACTATTTGCGAGGAAGATGGAGTCGCAGTTCAAGTTTTGACTAA 2073 0.4182 MKLIGDGDGGRKVLVGVKLDPRSRELLTWALVKVAEPGDLVIALHVLDTVTEGTSSLLSLVKTLDSVLAVYEGFCNLKQVDLKLKVCRGDSVRKLLVQEAKALGVSTVILGTSKSHHTIRSSAWVAKYCAKKLHKCVSVFAVDNGKIAFQREATAQEKLQWSYLIFTNKSVKDCGSCALGEISETEFNQGELLDYCETENPLALVPFQKHDDESVVGDESLVGDSKRMKPGWSLIRNVFHSKRHTTKSSPKSTFVFQRGVRHSTSHSSSVVYPDHKQINIDPIDDSTLDGESGAIVPYGSAIILPPPTLCSDADSLSEELLILRDKYSSSCRLYSLQELVAATVNFSSENLVGKGGSSVVYRGCLSDGKELAVKILKPSENVLKEFAQEVEIVTTLNHNNIISLSGFCLEGNHLLLVYDFLSRGSLEENLHGNKKDYNSFGWQERYRVAVGVAEALDYLHNGCAQSVIHRDVKSSNILLSDDFEAQLSDFGLASWGSSSSQIICTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNERPKGHESLVMWATSVLKSGKISQLLDPSLGSEYNNCQIKRMVLAATLCIRRVPRLRPQIGVILKLLHGDEEVTRWAEQEVCAPETHDGFDEELFPTNIQSHLNLALLDLEDDAVSICSTEQCVSLEDYLRGRWSRSSSFD* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3373 690 Pfam Universal stress protein family 11 136 IPR006016 -
Mtr3g3373 690 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 115 - -
Mtr3g3373 690 ProSiteProfiles Protein kinase domain profile. 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3373 690 CDD USP_Like 12 137 - -
Mtr3g3373 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Mtr3g3373 690 SUPERFAMILY Protein kinase-like (PK-like) 327 633 IPR011009 -
Mtr3g3373 690 SMART serkin_6 346 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3373 690 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Mtr3g3373 690 Gene3D Phosphorylase Kinase; domain 1 314 420 - -
Mtr3g3373 690 Gene3D Transferase(Phosphotransferase) domain 1 421 632 - -
Mtr3g3373 690 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 163 684 - -
Mtr3g3373 690 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 156 - -
Mtr3g3373 690 PANTHER OS01G0253100 PROTEIN 7 156 IPR045271 GO:0004714|GO:0006468
Mtr3g3373 690 PANTHER OS01G0253100 PROTEIN 163 684 IPR045271 GO:0004714|GO:0006468
Mtr3g3373 690 Pfam Protein kinase domain 348 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3373 690 Gene3D HUPs 10 143 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3373 Mtr-Chr3 47616172 47619823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3373 333 612 Trihelix Transcription Factor Family AT1G68690 44.561 4.63e-74 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr3g3373 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3373 - - gmx:100815722 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3373 3 47616172 47619823 Mtr3g3373 3 47616172 47619823 ECH