Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3365 ATGAAGAAACAATGGTGTGAGATTGAGGCAATAGGCATCAACTACAAGATCACATCAAAGCAACCTTCTAAAATCTTCAACAAACCTCCAAAACCTGATGGTGAAGAAGATGGTGAGAAAACAGAAGATGAAGCAAAAGCTGAACAAAGGCAAGGTGGTGGAGTTAAGCATGTCCTCAAGGATGTTAATTGCATAGCCAAGCCATGTGAAATTCTTGCAATTGTTGGGCCAAGTGGAGCAGGAAAATCATCATTGCTTGAGATTCTTGCTGGTAGAGTTAGTCCACAAAATGGTGGTTCTATTCTGGTGAACCAGGAGCATGTAAATAAATCTCAGTTCAGAAAAATTTCAGGGTATGTTACACAAAAAGACACCCTTTTCCCCTTACTTACAGTTGAAGAAACCATGATGTTTAGTGCAAAACTAAAGTTAAATCTTTCTCCAGAAAAACTAAGCTGTAAGGTTAAGTCATTGATTCAAGAGCTTGGTCTTAGTCATGTTTCAAGTACTAGAGTAGGAGATGGAGATGACAGGGTCCGCGGAATATCCGGTGGTGAGAGGCGCCGTGTTTCCATTGGTGTTGAAGTCATACATGATCCAAAAGTGTTGATTCTTGATGAAGCAACTTCAGGTCTTGACAGTACCTCAGCTCTGCAAATAATTGATATGCTGAAAGTCATGGCTGAATCTAGGGGAAGAACTATAATACTAAGTATTCATCAACCCGGGTTCCGGATAGTGAAGTTGTTGAATTCAATACTGTTGTTGGTGAATGGCAGTGTGTTACATCATGGAACTGCAGATTTGTTGGATGTGAATCTGAGGTTGATGGGTTTAGAGCTTCCTCTTCATGTCAACATTGTTGAGTTTGCTATTGAATCCATTGAGACTATTCAGGAACAACAAAAGAGTCAGCAAGTTCAGATCGAACCACCGAAACGATTACAAGGGACAATGCTACTAAAGAAAGGCAATGATCAAGGTGAAAGTAGAAGCGGTAAGTTTACTCTGCAACAGCTATTTCAACAATCCAAGGTATTTGACATAGAAAACATGAATGTAGGAATGGATTTCACTAGTGATTATGCGAATTCTAGATTGAGAGAAACTATGATTCTAGCTCATAGGTTCTCAAAAAATATTTTCCGTACAAAGGAGCTCTTTGCATTTAGGACTATTCAGATGCTGATTTCAGGGCTGGTTTTAGGATCCATCTTTGGTAATCTCAAAGATGGTCTCGTGGGAGCAGAACAAAGGGTTGGTCTATTTGCTTTCATTTTAACGTTTTTGTTATCGAGTGCCATTGAAGCTCTACCGATTTTTCTACAAGAAAGGGAGATTCTAATGAAGGAGACTTCAAGTGGAAGCTACAGAGTTTCATCTTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTACTCATACTAGCCATTTTATTCGCAGTGCCGCTTTACTGGATTATCGGTCTCAACCAAAATTTCACAGCGTTTTTGCACTTTTTGTTGCTAATATGGCTGGTTTTGTATACCGCAAACTCGGTTGTGGTCTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGAAATTCGATAATCGCCGGTGTCATTGGTTCTTCTTTCTTGTTCTCTGGTTACTTCATATCCAATCATGAAATTCCAAACTACTGGATTTTCATGCACTATTTGTCCCTATTTAAGTATCCATTTGAAGGGTTTCTAATAAATGAGTTCTCCAACTCAAAGAAGTGCTTAGAGTACATGTTTGGGGCATGTGTGATGAAAGGAGAGGATGTACTTAAAGAAGAAGGGTATGGAGGAGAGAGTAGTAGATGGAAGAATGTTGGGGTGATGGTGTGCTTCATCTTTGTTTATAGATTCATTTCTTATGTAATTCTCAGATACAGATGCTCCCAGAGTGCCACCTTCTGA 1932 0.3949 MKKQWCEIEAIGINYKITSKQPSKIFNKPPKPDGEEDGEKTEDEAKAEQRQGGGVKHVLKDVNCIAKPCEILAIVGPSGAGKSSLLEILAGRVSPQNGGSILVNQEHVNKSQFRKISGYVTQKDTLFPLLTVEETMMFSAKLKLNLSPEKLSCKVKSLIQELGLSHVSSTRVGDGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEATSGLDSTSALQIIDMLKVMAESRGRTIILSIHQPGFRIVKLLNSILLLVNGSVLHHGTADLLDVNLRLMGLELPLHVNIVEFAIESIETIQEQQKSQQVQIEPPKRLQGTMLLKKGNDQGESRSGKFTLQQLFQQSKVFDIENMNVGMDFTSDYANSRLRETMILAHRFSKNIFRTKELFAFRTIQMLISGLVLGSIFGNLKDGLVGAEQRVGLFAFILTFLLSSAIEALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILAILFAVPLYWIIGLNQNFTAFLHFLLLIWLVLYTANSVVVCFSALVPNFIVGNSIIAGVIGSSFLFSGYFISNHEIPNYWIFMHYLSLFKYPFEGFLINEFSNSKKCLEYMFGACVMKGEDVLKEEGYGGESSRWKNVGVMVCFIFVYRFISYVILRYRCSQSATF* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3365 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 267 IPR027417 -
Mtr3g3365 643 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 283 IPR003439 GO:0005524
Mtr3g3365 643 Pfam ABC transporter 59 210 IPR003439 GO:0005524
Mtr3g3365 643 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 635 - -
Mtr3g3365 643 Pfam ABC-2 type transporter 370 578 IPR013525 GO:0016020|GO:0140359
Mtr3g3365 643 Gene3D - 45 334 IPR027417 -
Mtr3g3365 643 SMART AAA_5 68 260 IPR003593 -
Mtr3g3365 643 MobiDBLite consensus disorder prediction 22 52 - -
Mtr3g3365 643 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524
Mtr3g3365 643 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3365 Mtr-Chr3 47528780 47531161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3365 57 302 Calmodulin-binding Proteins AT2G36910 22.348 2.40e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3365 K05681 - gmx:121172640 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3365 3 47528780 47531161 Mtr3g3365 3 47528780 47531161 ECH