Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3364 ATGGGAGATACTGTCAAGCTTCCTCCTGGATTTGTCTTCTCTCCAACAGATGAAGAACTTATCCTTCATTTTCTCTATTCTAAGAAGGCTTCTCTTATTTCATCTCATCCAAACTTCATCCCTGATCTAGACCCGTCTCTACTTGTTCCTTGGGAATTAAATGATAAGGCATTGTGCGGTGGAAATGATGAATACTATTTCTTCGCCAAAGTGAAGGAAAATAAATCCAGTACTGAGAATGGGCATTGGGAGGAAATTGGTGTGACAGTACCAATATTTTCAGGCACTGACCAGAAAGTGGGAATGAAGAAGTACCTATTATTCCACATTGGCGAATTAGCACAAAGTTTTGAAACAAGTTGGGTAATGCAAGAATATCATATTTGCTCCACTGGATTTGATCAAAGTACTGTTTCATATCATGGTGATAATAAAGTGGGTGAAAATTGGAGCGAGTGGGTTTTATGCAGAGTGTATGAAATTGATAAGAACATGTATCCTCAAGAAGGTGTAAATTACTGCAACAGCGATGATGATGACAGTGGAACTGATCTTTCATGGCAAGACCAAGTTTTTCTGTCTTTGGAGTTGGAAGATGACATGGAAGGAATAACCATGCCTCAGTAG 627 0.3907 MGDTVKLPPGFVFSPTDEELILHFLYSKKASLISSHPNFIPDLDPSLLVPWELNDKALCGGNDEYYFFAKVKENKSSTENGHWEEIGVTVPIFSGTDQKVGMKKYLLFHIGELAQSFETSWVMQEYHICSTGFDQSTVSYHGDNKVGENWSEWVLCRVYEIDKNMYPQEGVNYCNSDDDDSGTDLSWQDQVFLSLELEDDMEGITMPQ* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3364 208 ProSiteProfiles NAC domain profile. 7 161 IPR003441 GO:0003677|GO:0006355
Mtr3g3364 208 PANTHER NAC TRANSCRIPTION FACTOR 56 4 201 - -
Mtr3g3364 208 Pfam No apical meristem (NAM) protein 8 128 IPR003441 GO:0003677|GO:0006355
Mtr3g3364 208 Gene3D NAC domain 16 166 IPR036093 GO:0003677|GO:0006355
Mtr3g3364 208 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 201 - -
Mtr3g3364 208 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3364 Mtr-Chr3 47524828 47525969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3364 7 167 NAC Transcription Factor Family AT1G61110 36.047 1.88e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr3g3364 NAM 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3364 - - gmx:100170711 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3364 3 47524828 47525969 Mtr3g3364 3 47524828 47525969 ECH