Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3349 ATGCCCACTTGGTGGGGTAAAAAATCCAGCAAACCCAAGGAGCACGAAGAGCCACGTGGCGGCAGCAGCACCAGCAACGGCAGCAGTGGCGGCGGCGGCGGCGTTCTTCACTTCAATTTTAGCAACAAGTCTCCGATCAGAAACTCTAATAAAAACGGTTATAAACCCGAAAACCCAAGGAGTTTCGACGATGCTTCTTCTAATTTTAGAAACACTCCCAGATCCAGTAGGGATTTCTCTCCTTCAATCAATTCTGCCGGCGGTGGTTCTTCCTCTTGTTGGGATTCTGATGCCGGTTATAAGACAGGGTTTCCTTTGCCTCATCCTTCAGTTTCTTCTACACAAAGCTTGAGCAATGATCAAGGAATTACTTTTGGATTTGGATCTGCTTCTGTTTCAGGTTCTAGTGTTAGCTCCAATGGCTCTTATGATGATCCTTCAACTTCTAACTCTCAGATTAATACCGCTAGAGGACAATGTGAAACGAAGTTCAATGTGAGGCCTAAAAGCCCGGGTCCAGGATCAAGGGGGCCCACAAGCCCGACATCACCTCTTCATCCAAGGTTGAATGTTTTGAGTCTTGACTCACCTACAAGCAGGCAAGAAGATGGAAGGAGTGAGTGTCATCCATTGCCTCTTCCGCCAGGCTCACCGACTAGTTCTTCTTCTCTTCCTAACAACACAAGACCAAATGGACTGATAGAAAGCAGTACCACTAACCGTGGCAGTTGGAAGAGAGGAAAGCTTCTAGGTCGGGGAACTTTTGGACATGTTTACTTGGGATTCAATAGTGAAAGTGGACAATTGTGTGCAATAAAAGAAGTCAGGGCTGTCTGTGATGATCAAACCTCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATAATTTTGCTGAGTAAACTTTCACATCCAAACATTGTTCAATACTATGGAAGTGATTTGGGAGAAGAAACACTTTCCGTTTATTTGGAATATGTCTCTGGAGGTTCTATTCATAAATTACTTCAGGAATATGGGGCCTTCAAAGAGCCTGTTATCCAAAATTATACTAGGCAGATTGTCTCTGGACTTTCCTATCTACATGCGAGAAACACAGTGCATAGGGATATTAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGCTAGCGGACTTTGGAATGGCTAAACATATAAATTCTTCATCCTCAATGCTTTCTTTCAAAGGAAGTCCACACTGGATGGCACCAGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTGTTGATATTTGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCTTGGAGTCAGTATGAAGGGGTGGCTGCAATATTTAAAATCGGGAACAGCAAAGACATGCCTGAAATTCCTGATCATCTCTCAAATGATGCAAAGAATTTCATTAAGCTATGCTTGCATAGAGATCCTTCAACTCGCCCCACAGCCCAAATGTTATTAAATCACCCCTTCATTCGAGATCAGTCAGCAACAAAAGCTGCTATTGTCAGAATAACCAGGGATGCTTTTCCATACATGTGTGATGGAAGCCGGACGCCGCCAGCTTCAGATCTTCACTCCAATAGAACTTGTATTGCTTCTCAGGATGCAGATTATGCGACAAAATCAGTTCTTGCAGCTTCACGAGCAGTAAGGAGCCCAAGAGACAACACAAGAATGATCACATCTTTGCCTGTATCTCCTTGTTCAAGTCCATTGCGACAGTCTGGTCCAGCTCACAAGAGCTGTTTCCTTTCTCCACCTCATCCAACTTACGCAATGATGGGACAAAATACCCTCACTTCATATGAATCATATCCAATGAGATCAAATACCAAGTTTACTCTTGATCCTTGGCATGAAACACATATGTACAAAGTCCGCACACCTGGTGCATCCCCAAGAACGAGACTTATTTGA 1944 0.4357 MPTWWGKKSSKPKEHEEPRGGSSTSNGSSGGGGGVLHFNFSNKSPIRNSNKNGYKPENPRSFDDASSNFRNTPRSSRDFSPSINSAGGGSSSCWDSDAGYKTGFPLPHPSVSSTQSLSNDQGITFGFGSASVSGSSVSSNGSYDDPSTSNSQINTARGQCETKFNVRPKSPGPGSRGPTSPTSPLHPRLNVLSLDSPTSRQEDGRSECHPLPLPPGSPTSSSSLPNNTRPNGLIESSTTNRGSWKRGKLLGRGTFGHVYLGFNSESGQLCAIKEVRAVCDDQTSKECLKQLNQEIILLSKLSHPNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLSYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSSSMLSFKGSPHWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPDHLSNDAKNFIKLCLHRDPSTRPTAQMLLNHPFIRDQSATKAAIVRITRDAFPYMCDGSRTPPASDLHSNRTCIASQDADYATKSVLAASRAVRSPRDNTRMITSLPVSPCSSPLRQSGPAHKSCFLSPPHPTYAMMGQNTLTSYESYPMRSNTKFTLDPWHETHMYKVRTPGASPRTRLI* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3349 647 MobiDBLite consensus disorder prediction 181 199 - -
Mtr3g3349 647 PANTHER MAP KINASE KINASE KINASE 1 629 - -
Mtr3g3349 647 Gene3D Transferase(Phosphotransferase) domain 1 242 523 - -
Mtr3g3349 647 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 629 - -
Mtr3g3349 647 CDD STKc_MEKK1_plant 243 500 - -
Mtr3g3349 647 SMART serkin_6 244 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3349 647 MobiDBLite consensus disorder prediction 107 161 - -
Mtr3g3349 647 MobiDBLite consensus disorder prediction 1 246 - -
Mtr3g3349 647 MobiDBLite consensus disorder prediction 41 97 - -
Mtr3g3349 647 SUPERFAMILY Protein kinase-like (PK-like) 242 571 IPR011009 -
Mtr3g3349 647 ProSitePatterns Protein kinases ATP-binding region signature. 250 273 IPR017441 GO:0005524
Mtr3g3349 647 MobiDBLite consensus disorder prediction 220 244 - -
Mtr3g3349 647 Pfam Protein kinase domain 245 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3349 647 ProSiteProfiles Protein kinase domain profile. 244 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3349 Mtr-Chr3 47442658 47447590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3349 1 563 MAP Kinase Kinase Kinase AT1G53570 55.923 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr3g3349 Pkinase 3.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3349 K04421 - gmx:100813122 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3349 3 47442658 47447590 Mtr3g3349 3 47442658 47447590 ECH
Mtr8g3283 8 43343146 43348027 Mtr3g3349 3 47442658 47447590 PCT
Mtr8g3471 8 45183688 45190538 Mtr3g3349 3 47442658 47447590 PCT