Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3342 ATGGAAAATGGAAAAGTTGCTGTGGTAAAGTCTCAAAGTGAAGCGAGGCTTGCCATTTTGGAACTTGCACACATTATGAGTGTTCCTACTTCCCTCGTTGCTGTTCTCAAAATGAAAGTACCTGAAGCTATCTGGCAAGGTGGAAACAACACCCCACTCTCTGCCTCTCAAATTCTCTCCATAGTTCGTCCCAACGGCGGAGGAGACGCTGAAAATCTCCAGCGTATCCTTCGTTTGCTCACCACTTATGCTATTTTTGCTGAGGACTTGAGCAGCAATGGCAAAAGGAAGTACTCCCTCACCGAGGTCGGTAAAGCTCTTGTTCCTGATGATGATGGTCTGTCCTATGGAACATACGTGCTCCAGCACTATCAGGACCAGTACCTGCGAGCATGGCCGCTGGTGGGAGAGGCGGTGGAGGATCCAACTGTTGAGCCGTTCGAGAAGCTACACGGAGAAGGAGCATATGCATACTGCATGAAGAGACCAGATGAAATGAGTTTGTTTTACGCTTCCATGTCTGGAATGTCAATGCCCCACATGAATGAAATGTTGGAGAAGTATGATGGCTTCAAAGGTGTGGAATCTCTAGTTGATGTTGGTGGAAATTCTGGTGTGATTCTCAATATGATTATGAACAAATATCCAAACATACTCAAAGGCATCAATTTTGATCTTCCTGATATGATATCTTCTGCCCCTCAATTGCCAGGTATAACACACGTCGGTGGTGATGCGCTTGAATTAGTTCCGGCTGGGGATGCTATCTTCACTAAGTGGACAATGTTAACATGGACAGATGAAGAATGCAAGAAGGTCTTGCAGAACTGCTACAAGGCTCTTCCGGTGAACGGAAAATTGATTGTTTGTGAGCCAGTGTCACCGGAGCTGACCGATGAGAGTCAAAGAACAAGAGCATTGTTGTCGGGTGACATATTCATAATGACAATGTATAAAACTAAGGGAAAACACAGAACTGAAGAACAATTCAAACAGCTTGGCATTTCTGCTGGTTTTCTTCGTTTTCGTGCCTTCCACATTGATCCTTATTTTCCTGTTCTAGAATTTCAGAAATGA 1077 0.4457 MENGKVAVVKSQSEARLAILELAHIMSVPTSLVAVLKMKVPEAIWQGGNNTPLSASQILSIVRPNGGGDAENLQRILRLLTTYAIFAEDLSSNGKRKYSLTEVGKALVPDDDGLSYGTYVLQHYQDQYLRAWPLVGEAVEDPTVEPFEKLHGEGAYAYCMKRPDEMSLFYASMSGMSMPHMNEMLEKYDGFKGVESLVDVGGNSGVILNMIMNKYPNILKGINFDLPDMISSAPQLPGITHVGGDALELVPAGDAIFTKWTMLTWTDEECKKVLQNCYKALPVNGKLIVCEPVSPELTDESQRTRALLSGDIFIMTMYKTKGKHRTEEQFKQLGISAGFLRFRAFHIDPYFPVLEFQK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3342 358 Pfam O-methyltransferase domain 135 339 IPR001077 GO:0008171
Mtr3g3342 358 Gene3D Vaccinia Virus protein VP39 113 358 IPR029063 -
Mtr3g3342 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 355 IPR029063 -
Mtr3g3342 358 Gene3D - 3 112 IPR036388 -
Mtr3g3342 358 PANTHER OS02G0823400 PROTEIN 8 357 - -
Mtr3g3342 358 PANTHER O-METHYLTRANSFERASE 8 357 IPR016461 GO:0008168
Mtr3g3342 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Mtr3g3342 358 SUPERFAMILY "Winged helix" DNA-binding domain 13 110 IPR036390 -
Mtr3g3342 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 358 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3342 Mtr-Chr3 47365684 47370666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3342 10 358 Monolignol Biosynthesis Gene Families AT3G53140 57.507 2.81e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3342 - - ccaj:109819366 502.671