Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3341 ATGGAAAATGGAAAAGTTGCTGTGGTAAAGCCTCAAAGTGAAGCGAGGCTTGCCATTTTGGAACTTGCACACATTATGAGTGTTCCTACGTCCCTTAATGCTGTTCTCAAAATGAAAGTACCTGAAGCCATCTGGCAAGGTGGAAAGAACACTCCACTCTCTGCCTCTCAGATTCTCTCCATAGTTCGTCCCAATGGCGGAGGAGACGCTGAAAATCTCCAACGTATCCTCCGTTTGCTCACAACTTATACTATTTTTGTTGAGGACTTGAGCAGCAATGGTGAAAGGAAGTACTCCCTCACCGATGTTGGTAAAGCTCTTGTTCCTGATGATCATGGTCTGACCTGTGCATCATTTTTCGTCCAGCACCATCAGGACCCGTACCTGCGAGCATGGCCGTTGGTGGGAGACGCGGTGGAGGATCCAACTGTGGAACCGTTCGAGAAGCTGCACGGAGAAGCAGCATATGCATATTGCACGAAGGGACCAGAAGAAATGAGTTTGTTTTATGCTTCCATGTCTGGGATGTCATTGCCCTACATGAGGGAAATGTTGGAGAATTATGATGGCTTCAAAGGTGTGGAGACTCTAGTTGATGTTGGTGGCAATTCTGGTGTGAGTCTCAACATGATTATGAACAAATATCCAAACATACTCAAAGGCATCAATTTTGATCTTCCTGATATGATCTCTTCTGCACCTCAATATCCAGGTATAACACACGTCGGTGGTGATGCGCTTGAATCAGTTCCGGCTGGAGATGCTATCTTCATTAAGTGGACAGTGTTAACATGGACAGATGAAGAATTCAAGAAGGCCTTGCAAAGTTGTTACAAGGCTCTTCCGGTGGCCGGAAAATTGATTCTTTGTGAACCGGTGTTACCGGAGCAGACCGATGAGAGTAAAAGAACAAGAGCATTGTTGGCAGCTGACATATGGATAATGACAATGTATAGAACCAAGGGAAAACACAGAACTGAAGAACAATTCAAACAACTTGGCATTTCTGCTGGTTTTAAAAGTTTCCGTGCCTTCCATATTGATCCTTATTTGCCTGTACTTGAATTTCATAAATGA 1077 0.4438 MENGKVAVVKPQSEARLAILELAHIMSVPTSLNAVLKMKVPEAIWQGGKNTPLSASQILSIVRPNGGGDAENLQRILRLLTTYTIFVEDLSSNGERKYSLTDVGKALVPDDHGLTCASFFVQHHQDPYLRAWPLVGDAVEDPTVEPFEKLHGEAAYAYCTKGPEEMSLFYASMSGMSLPYMREMLENYDGFKGVETLVDVGGNSGVSLNMIMNKYPNILKGINFDLPDMISSAPQYPGITHVGGDALESVPAGDAIFIKWTVLTWTDEEFKKALQSCYKALPVAGKLILCEPVLPEQTDESKRTRALLAADIWIMTMYRTKGKHRTEEQFKQLGISAGFKSFRAFHIDPYLPVLEFHK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3341 358 SUPERFAMILY "Winged helix" DNA-binding domain 14 110 IPR036390 -
Mtr3g3341 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Mtr3g3341 358 Gene3D Vaccinia Virus protein VP39 114 358 IPR029063 -
Mtr3g3341 358 PANTHER O-METHYLTRANSFERASE 8 357 IPR016461 GO:0008168
Mtr3g3341 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 355 IPR029063 -
Mtr3g3341 358 PANTHER OS02G0823400 PROTEIN 8 357 - -
Mtr3g3341 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 358 IPR016461 GO:0008168
Mtr3g3341 358 Gene3D - 4 113 IPR036388 -
Mtr3g3341 358 Pfam O-methyltransferase domain 134 340 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3341 Mtr-Chr3 47354914 47359017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3341 12 358 Monolignol Biosynthesis Gene Families AT3G53140 57.265 2.58e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3341 - - ccaj:109819366 494.582