Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3326 ATGAGTTTGGCGGACCCAGAATTCTTTGAGGAAGGTTCGGCTCTTCTTGAGCCTCCTGATCCAGATGTTGTTGAAATTGACCCTACTTGTCGTTACCTTAGGTATAAGGAAGTCATAGGCAAAGGAGCTTTCAAGACTGTTTATAAGGCATTTGATGAAGTCACTGGGCTTGAAGTTGCGTGGAGCCAAGTTCGGATTGACGAGGTATTACAATCACCAGGTGACCTAGAAAGGCTCTATTCAGAAGTGCATCTCTTGAGGTCGTTGAAGCACAGTAACATTATAAGGTTCTACAATTCCTGGATTGATGACAAGCACGGGAATGTTAACATGATTACCGAGTTGTTCACCTCAGGGAGCCTCAGACAGTACCGTAAGAAACACAAGAAGGTTGACGTGAAAGCTGTTAAAGGATGGGCGAGACAGATTTTAATGGGTTTAGTCTACCTCCACAATCACAATCCACCTATTATACATAGGGATGTCAAGTGTGATAACATATTTATAAATGGTCATCAAGGAGAAGTTAAGATTGGAGATCTGGGGTTGGCAACTCTCTTGAAGCAGAATAATGCCAAGAGTGTAATTGGAACTCCGGAGTTTATGGCGCCTGAACTGTACGACGAAGATTATAATGAATTAGCCGACATATATTCTTTTGGAATGTGCATGCTGGAGTTGGCTACTTCTCAGTATCCTTATAGAGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCAGTTTCTCTTTCTACGATCAAAGATCCAGAAATAAAATCATTTATTGAGAAATGTCTTGTCCCAGCATCTCAAAGATTATCAGCAAAGGAGCTTCTGATGGACCCTTTTCTTGAAGTGAATTTTTCAGTAAAGAATCGTCCTCTTCCATTACCAGATATTGTTCTACCTAAATTCGGAGGCTTTGAAAATCGTTGTCTAATGTCAGAAGGTCCTGCTAGTGCACGTATTGGATCCAGTTCAATGGAACTTGGTGATACCAATGAGCAACCAGTGATCACTGTATCTTATAATTCTGTCGATGATGCACCACCTTCTCCATGTGTTGAGATACGAAGGTTGATGGGAGTTGATAGATTTTTTCTCAAAGGTGAAGCAAATGACACGAATTCTATATCATTAGTGCTCCGGATAATTGATCAGGGTGGGCGAGCAAGAAATATCCATTTCATATTCTACCTCGACAGTGATACGGCCATGTCAGTGTCAAGTGAAATGGTTGAGCAACTTGAACTTGCCGAGCATAATGTTAAATTCATCGCCGAGTTGATTGATTTGTTATTGACAACATTGATTCCTGATTGGAAACCTTGTGTAGCGATTGACCACTTAATTTCTCCAAATGGTAGACGAACTCATATGAGCCAACAGAAACAACTCTCACAATTGGCAAAGTACAAACAAAACTCAATAGATTCTAGCCAAATCATGAGGGAATATGTAGGTCCCTCAACCTCACATGAGAGATTAGCTGAAAAAGAAAACATTGATAATATGAATTTTGAAGATGTTTTCTCCCATGCAAGCATTGGTCTTCAAAGAACAACAAAGACAGATGATTTGTATTCTATGACATCATATACTTCAGCAACATCTGACTACAATGATAAGAATTTTTCTACAGTTTCATTCATGTCTGCTAGGTCAGGATTCACAGACTTCAACTTTCCTACCGTAAATGGGTGGGGGAGCCAATCCTCGCTTGCATCTGAAATCGGGGCATCCTATGATAAAAAGAGCAAGTTTCCATGCATGGAAAACAACAATTATCCCCTTAGTACTTCCTCATTTCATGAAGCTGAGGATGAGTTAAGAATAGAGTTAGAGAAGATTGAACGACAATATCAAGAGGCAATGAAAGATTTATGCAAAAGAAGACACGACGCCATGATGGAGACCAGAAAGAGGCTATCACAAAAAAATTCAATCATAGAATAA 1974 0.3977 MSLADPEFFEEGSALLEPPDPDVVEIDPTCRYLRYKEVIGKGAFKTVYKAFDEVTGLEVAWSQVRIDEVLQSPGDLERLYSEVHLLRSLKHSNIIRFYNSWIDDKHGNVNMITELFTSGSLRQYRKKHKKVDVKAVKGWARQILMGLVYLHNHNPPIIHRDVKCDNIFINGHQGEVKIGDLGLATLLKQNNAKSVIGTPEFMAPELYDEDYNELADIYSFGMCMLELATSQYPYRECRNSAQIYKKVSSGIKPVSLSTIKDPEIKSFIEKCLVPASQRLSAKELLMDPFLEVNFSVKNRPLPLPDIVLPKFGGFENRCLMSEGPASARIGSSSMELGDTNEQPVITVSYNSVDDAPPSPCVEIRRLMGVDRFFLKGEANDTNSISLVLRIIDQGGRARNIHFIFYLDSDTAMSVSSEMVEQLELAEHNVKFIAELIDLLLTTLIPDWKPCVAIDHLISPNGRRTHMSQQKQLSQLAKYKQNSIDSSQIMREYVGPSTSHERLAEKENIDNMNFEDVFSHASIGLQRTTKTDDLYSMTSYTSATSDYNDKNFSTVSFMSARSGFTDFNFPTVNGWGSQSSLASEIGASYDKKSKFPCMENNNYPLSTSSFHEAEDELRIELEKIERQYQEAMKDLCKRRHDAMMETRKRLSQKNSIIE* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3326 657 CDD STKc_WNK 31 290 - -
Mtr3g3326 657 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3326 657 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3326 657 SUPERFAMILY Protein kinase-like (PK-like) 34 291 IPR011009 -
Mtr3g3326 657 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3326 657 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Mtr3g3326 657 Coils Coil 609 633 - -
Mtr3g3326 657 Gene3D - 382 479 - -
Mtr3g3326 657 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 5 653 - -
Mtr3g3326 657 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 653 - -
Mtr3g3326 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Mtr3g3326 657 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3326 Mtr-Chr3 47167839 47171626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3326 133 459 MAP Kinase Kinase Kinase AT1G49160 69.113 1.05e-163 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mtr3g3326 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3326 K08867 - gmx:121175054 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3326 3 47167839 47171626 Mtr3g3326 3 47167839 47171626 ECH
Mtr8g3262 8 43066396 43070102 Mtr3g3326 3 47167839 47171626 PCT