Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3322 ATGGAATATGAATATGATTGTGATTTTGAAGAAAAATTGGTAAGAGAAGAAGGAAACAACAAAAACTACTATTATGTTTTAAAGTCCAAAATCGGAGAAGGTTCTTTTTCCACAGTGTGGAAAGCTGAACAAAGACCAAGTGGTGAAGATGTAGCGGTGAAGCAAGTCTTTCTCTCCAAACTCAACTCTCACCTCAGAGCTTCCTTGGACTGTGAGATCAACTTTTTGTCTTCTGTTAATCATCCTAATATTGTTCACCTTCTTCACTTCTTCCAGGGTAATGGATGTGTTTACTTGGTTCTTGAGTTTTGTGCTGGAGGGAATCTAGCTTCTTATATTCGATGCCATGAAAGAGTTCATCAACTAACCGCCAAAAAATTCATCCAGCAACTTGGCTCTGGTTTAAAAGTACTACACTCTCATGGCATCATTCATAGAGACTTGAAACCCGAGAACATTTTGCTATCAAGCCATGGTGCCGATGCAGTGCTGAAAATAGCTGATTTTGGTCTCTCAAGAACTGTCCGCCCAGGTGAGTATGTGGAGACAGTTTGTGGAACTCCATCGTACATGGCTCCTGAAGTTCTTCAGTTCCAGAGATATGATCACAAGGCAGACATGTGGAGTGTTGGGGCCATGCTTTTTGAGCTTCTAAATGGTTATCCACCTTTTAATGGCAGAAATAATGTTCAGGTGTTGAAAAACATAAGATCATGTACCTGTCTTCCATTTTCTCAATCGGTCCTTTATGGAATGGATTCTGCCTGTCTTGATATTTGTTCAAGACTACTGTGCTTAAATCCAGTGGAGCGCCTCTCTTTCGATGAATTTTATTTCCATAGCTTTCTACGAGGAAAATCATTGGGACCTTGA 873 0.4021 MEYEYDCDFEEKLVREEGNNKNYYYVLKSKIGEGSFSTVWKAEQRPSGEDVAVKQVFLSKLNSHLRASLDCEINFLSSVNHPNIVHLLHFFQGNGCVYLVLEFCAGGNLASYIRCHERVHQLTAKKFIQQLGSGLKVLHSHGIIHRDLKPENILLSSHGADAVLKIADFGLSRTVRPGEYVETVCGTPSYMAPEVLQFQRYDHKADMWSVGAMLFELLNGYPPFNGRNNVQVLKNIRSCTCLPFSQSVLYGMDSACLDICSRLLCLNPVERLSFDEFYFHSFLRGKSLGP* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3322 290 Pfam Protein kinase domain 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3322 290 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 26 279 IPR045269 GO:0004674|GO:0006914
Mtr3g3322 290 Gene3D Transferase(Phosphotransferase) domain 1 16 288 - -
Mtr3g3322 290 SUPERFAMILY Protein kinase-like (PK-like) 20 285 IPR011009 -
Mtr3g3322 290 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Mtr3g3322 290 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 26 279 - -
Mtr3g3322 290 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3322 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Mtr3g3322 290 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3322 Mtr-Chr3 47151995 47154439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3322 25 277 CBL-interacting serine-threonine protein kinases AT1G01140 37.165 6.01e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Mtr3g3322 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3322 - - lja:Lj1g3v1289070.2 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3322 3 47151995 47154439 Mtr3g3322 3 47151995 47154439 ECH