Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3321 ATGCAGCAACTTGAACATTTTGCTATCAAGCCATGGTGCGGATACACAACTGAAGATAGCTTATTTTGGTATCTCAAGGTGAGTATGTTGAGACAGTTTGTGGAACTCCATTATACATGGCTCCTGTCTCCTGAAGTTCTACAGTTCCAGAGATATGATCACAAGGCAGACATGTGGAGTGCTGGGGCCATGCATTTTGAGCTTCTAAATGGTTATCCACCTTTTAACGGCAGAAATAATGTTCAGGTGTTGAAAAACATCAAATCCTGTACCTGTCTTCCATTTTCTCAATCAATTCTTTATGGATTGGACTCTGCCTGTCTTGATATTTGTTCAAGAGTCAAGACTATTGTGCTTAAATCCAGTTGA 369 0.4011 MQQLEHFAIKPWCGYTTEDSLFWYLKVSMLRQFVELHYTWLLSPEVLQFQRYDHKADMWSAGAMHFELLNGYPPFNGRNNVQVLKNIKSCTCLPFSQSILYGLDSACLDICSRVKTIVLKSS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3321 122 Pfam Protein kinase domain 40 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3321 122 SUPERFAMILY Protein kinase-like (PK-like) 42 99 IPR011009 -
Mtr3g3321 122 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 42 114 IPR045269 GO:0004674|GO:0006914
Mtr3g3321 122 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 42 114 - -
Mtr3g3321 122 Gene3D Transferase(Phosphotransferase) domain 1 17 116 - -
Mtr3g3321 122 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3321 Mtr-Chr3 47141281 47144345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3321 42 87 AGC Kinase Gene Family AT5G62310 43.478 2.78e-07 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Mtr3g3321 Pkinase 6.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3321 - - mtr:MTR_3g095580 239.195