Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3318 ATGGCTGCAATGAACTCAAGTGTATTAGCTTGTAGCTATGCCATATCTGGTTCTGAGCTCAATGCAAAGCTCATTTCAGTGCCCTCTGCTGCATCACCAGGGGTTTCAGGTATCAAGCTACCATTGATCAAGGCTCAGCAGGTGAGAATTCCTGAAGCCAAAGAATCAAGAGCAAGTGATGGAAGAAGAAATGCTCTTGCTTTATTGGCAGCTACACTTTTCACCACTGCTGTTTCAGCCTCCAATTCTTCTGCTAATGCTGGCGTTATTGAAGAATACCTTGAAAAAAGCAAGGCCAATAAGGAATTGAATGACAAGAAGAGGTTAGCCACTAGTGGAGCAAATTTTGCAAGAGCATATACAGTGCAATTTGGTACTTGCAAGTTCCCTGAGAATTTCACCGGTTGCCAAGATCTTGCTAAACAGAAGAAAGTACCATTCATTACAGAAGATTTGGAACTTGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 519 0.4162 MAAMNSSVLACSYAISGSELNAKLISVPSAASPGVSGIKLPLIKAQQVRIPEAKESRASDGRRNALALLAATLFTTAVSASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWKW* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3318 172 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 172 IPR008796 GO:0009522|GO:0015979
Mtr3g3318 172 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 42 172 IPR008796 GO:0009522|GO:0015979
Mtr3g3318 172 Gene3D - 88 172 IPR044907 -
Mtr3g3318 172 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 172 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3318 1 143 Calmodulin-binding Proteins AT5G64040 66.667 1.57e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3318 K02701 - csv:101204396 271.166