Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3313 ATGAAAGGAATGAAGCCATATGTGGTTGTGTTTGTGATACAAACTATATACGCAATTATGTTTCTACTCTCAAAAGCTGCATTTGATCATGGCATCAACAATTTCATCTTTGTGTTCTATAGACAAGCAGTAGCAACCATATTCCTTATCCCTTTTGTTTTCATCTTTGAATGGAAACTTGCACCCCCATTGTCTTTGAGGACCTTCTGCAAGATTTTCCTTCTTTCTTTCTTCGGGATTACTATGGCCATGGATTTAAATGGTGTTGGTCTGATTTACACCTCTCCAACTTTGGCAGCTGCTTCCACAAACTGTCTTCCAGTTATCACCTTCTTCTTAGCGCTCCTACTTAGGATCGAAAGTTTGAAAATAAAGACGGTTGCTGGGATTGCTAAGTTGGTAGGCATTGTGGCATGTTTGGGTGGTGCAGCTACCCTTGCCTTTTATAAAGGTCCTCATTTACAACTTTTAAGTCATCATCATCACCTTCTGGGATACCATAAACAACATGATCAAAGTCATTCTCCATCTGGTACATGGATAAAAGGTTGCTTTTTCTTACTGCTCAGCAACACATTTTGGGGCCTATGGTTGGTGCTACAGGCTTTTGTATTAAAAGACTACCCTTCAAAGTTGAGCTTTACGACTCTCCAATGTTTCTTAAGCTCAATTCAATCTTTAGCTATTGCCTTGGCCATAGAAAGGGACATTGAGCAGTGGAAATTGGGTTGGAACGTCAGCCTCCTCGCTATAGCCTATTGTGGAATTATTGTGACAGGGGTCGGATATTACTTAATGACATGGGTCATAGAGAAGAAAGGGCCTGTGTTTCTTGCTATGTCAACACCACTAGCTCTTATTATTACAATCCTCTCCTCTATATTTCTCTTCGGTGATATAATAAGTTTGGGAAGCATTTTAGGTGGGTTCATGTTAGTAGTAGGACTATACAGTGTGCTTTGGGGAAAGAGCAGAGAGCAAACACAAAAAGCCTCACAAGACTTGGAACAGGCATCCAGTTAA 1023 0.4047 MKGMKPYVVVFVIQTIYAIMFLLSKAAFDHGINNFIFVFYRQAVATIFLIPFVFIFEWKLAPPLSLRTFCKIFLLSFFGITMAMDLNGVGLIYTSPTLAAASTNCLPVITFFLALLLRIESLKIKTVAGIAKLVGIVACLGGAATLAFYKGPHLQLLSHHHHLLGYHKQHDQSHSPSGTWIKGCFFLLLSNTFWGLWLVLQAFVLKDYPSKLSFTTLQCFLSSIQSLAIALAIERDIEQWKLGWNVSLLAIAYCGIIVTGVGYYLMTWVIEKKGPVFLAMSTPLALIITILSSIFLFGDIISLGSILGGFMLVVGLYSVLWGKSREQTQKASQDLEQASS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3313 340 PANTHER WAT1-RELATED PROTEIN 7 330 - -
Mtr3g3313 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
Mtr3g3313 340 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Mtr3g3313 340 Pfam EamA-like transporter family 5 134 IPR000620 GO:0016020|GO:0016021
Mtr3g3313 340 PANTHER WAT1-RELATED PROTEIN 7 330 IPR030184 GO:0016021|GO:0022857
Mtr3g3313 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3313 Mtr-Chr3 47082986 47086470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3313 1 254 Nodulin-like Gene Family AT5G64700 58.915 1.62e-96 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3313 - - gmx:100804562 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3313 3 47082986 47086470 Mtr3g3313 3 47082986 47086470 ECH
Mtr3g3313 3 47082986 47086470 Mtr8g3240 8 42923733 42928897 ECH
Mtr8g3240 8 42923733 42928897 Mtr3g3313 3 47082986 47086470 PCT