Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3311 ATGGGTGAACTAGGTCCATATTTGGCTGTGTTTATAATACAATTAATATATTCTGGGATGACTTTGTTATCCAAAGCTGTGTTTAACGGAGGAATGAAAACATATGTGTTTGTTTTTTATAGACAACTGATTGGAGCCATTATCATGGTCCCTTTAGCTTTAATATTTGAAAGGAAACAAGCCGTGCCAGTAACATTCTCATTTATGACCATCTTCAAGATTTTTATGCTTTCATTATTGGGACTTACTTTAACTCTGAATGTGCATGGTGTTGCTCTTTCTTATACTTCTGCTATGCTGTCTGGTGCAATTGTTAATTGTCTTCCGGCTTCGACATTCTTCTTTGCTGTTCTGCTCAGAGTGGAGAAGGTAAATATAAGGACAAAATCTGGAATTTCAAAGATAGGGAGTGTTTTATTGTGCATGGCCGGTGTAGCGATTCTGGCCTTTTACAAGGGACCCCAATTGCGAATTGCACGTCACCTCCCATCTGGATATCATCACAACTATCAACAACATGAAGATAGTGAATCATATGACAAAAAATGGATTTTGGGTTCTTTACTCTTGTTCCTAACTACCATTACCTGGAGTTTGTGGATTGTACTTCAGGCTCAGTTGCTTAAAACTTACCCTTCAAAGCTAAGGTTCATGAGCATTCAAAGCCTATCAAGTGCAATTCAGTCATTTGTCATTGCTATAGCTTTTGAAAGAGATATTGAGCAGTGGAAGTTGGGTTGGAACATGAGACTGCTAGCCGTTGTTTACTGTGGGACACTAGTGACTGCAGTTGCCTACTACTTGCAAGCATTGGTGATTGAGAAGAAAGGACCAGTTTTCCCAGCAACTTGGACCCCAATGAGTTTTATAATTGCCACAATCGGTTCTGTCTTGCTCTTGGGCGAGCCACTATGTTTAGGAAGTGTTTTTGGTGGGATTTTGCTTGTTTTAAGTCTGTACTCTGTTTTGTGGGCAAAAAGCAAAGAAGGAATCACACAAAATTCTTTACCTATTATTCAAGATCATAAAGAGTGTGCAAATCAGGTGAAAACAGAGGTCCCATGTATCAAACCACCGCAATGA 1083 0.3924 MGELGPYLAVFIIQLIYSGMTLLSKAVFNGGMKTYVFVFYRQLIGAIIMVPLALIFERKQAVPVTFSFMTIFKIFMLSLLGLTLTLNVHGVALSYTSAMLSGAIVNCLPASTFFFAVLLRVEKVNIRTKSGISKIGSVLLCMAGVAILAFYKGPQLRIARHLPSGYHHNYQQHEDSESYDKKWILGSLLLFLTTITWSLWIVLQAQLLKTYPSKLRFMSIQSLSSAIQSFVIAIAFERDIEQWKLGWNMRLLAVVYCGTLVTAVAYYLQALVIEKKGPVFPATWTPMSFIIATIGSVLLLGEPLCLGSVFGGILLVLSLYSVLWAKSKEGITQNSLPIIQDHKECANQVKTEVPCIKPPQ* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3311 360 Pfam EamA-like transporter family 6 133 IPR000620 GO:0016020|GO:0016021
Mtr3g3311 360 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Mtr3g3311 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 327 - -
Mtr3g3311 360 PANTHER WAT1-RELATED PROTEIN 5 339 - -
Mtr3g3311 360 PANTHER WAT1-RELATED PROTEIN 5 339 IPR030184 GO:0016021|GO:0022857
Mtr3g3311 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3311 Mtr-Chr3 47071318 47073879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3311 6 257 Nodulin-like Gene Family AT5G64700 52.344 2.00e-82 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3311 - - vun:114162763 459.144