Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3310 ATGACTATGAGTGAACTAGGTCCATATTTAGCAGTGTTAACAATGCAATTAATATATGCCGGGATGACCTTGATGTCCAAGGCCGTGTTTAACGAAGGAATGAAAACCTCTGTGTTTGTCTTCTACAGACAACTGATTGGAGCCATGATTATGGTCCCTTTGGCTTTGATATTTGAACGCAAACAAGCCGTGCCAGTGAAATTCTCATTTAAGACCATCTTCAAGATTTTTATGCTTTCACTATTTGGAATTACTTTAGCTCTGAATGTGCATGGTATTGCCCTTGTTTACACTTCTGCTTCGTTGGCTGCTGCTATTGTTAATTGCCTTCCTGCTTGTACATTCTTCTTTGCTGTTCTGCTCAGATTGGAAAAGGTAAATATAAGGACAATATCTGGAATTTCAAAGATAGTGAGTGTATTATTGTGTATGGCTGGTGTTGCGATTCTGGCATTTTACAAGGGACCTCAAATACGGATTGCGCGGCATCTCCTATCTGGATATCATCACAACTATCAACAACATAAAGATAGTGAATCACATGAGAAAAAATGGATTTTGGGTTCTTTCCTCTTGTTCCTAGCCACAGTCATGTGGAGTTTGTGGATTGTATTTCAGGCTCAGTTACTTAAAAGTTACCCTTCAAGATTAAGGTTCATGAGCATTCAGAGCATATCTAGTGCAATTCAGTCATTTATCATTGCTATAGCTTTTGAAAGAGATTTTGAGCAGTGGAAGTTGGGTTGGAACATGAGACTGTTAGCTGCTGTTTACTGTGGGGTACTAGTGACTGGAGTTTCATATTACCTGCAAGCATTGGTGATTGAGAAGAGAGGACCAGTTTTCTCAGCAACTTGGAATCCACTGAGTTTTATAATTGCCACAATTGGTTCTGTCTTCCTCTTGGGTGAGCCACTACGTTTAGGGAGTGTTTTGGGTGGGATTGTGCTGGTTTTAAGTTTGTATACTATTTTATGGGCAAAAAGAAAAGAAGGAGTCACTCAACACAATTCTTTACCTATTCAAGGATATAACAAAGAATGTCCAGATCAGGTGAAAACAGAGGACATATGCACCAAACCACCGCAATGA 1092 0.3947 MTMSELGPYLAVLTMQLIYAGMTLMSKAVFNEGMKTSVFVFYRQLIGAMIMVPLALIFERKQAVPVKFSFKTIFKIFMLSLFGITLALNVHGIALVYTSASLAAAIVNCLPACTFFFAVLLRLEKVNIRTISGISKIVSVLLCMAGVAILAFYKGPQIRIARHLLSGYHHNYQQHKDSESHEKKWILGSFLLFLATVMWSLWIVFQAQLLKSYPSRLRFMSIQSISSAIQSFIIAIAFERDFEQWKLGWNMRLLAAVYCGVLVTGVSYYLQALVIEKRGPVFSATWNPLSFIIATIGSVFLLGEPLRLGSVLGGIVLVLSLYTILWAKRKEGVTQHNSLPIQGYNKECPDQVKTEDICTKPPQ* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3310 363 PANTHER WAT1-RELATED PROTEIN 7 341 - -
Mtr3g3310 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 330 - -
Mtr3g3310 363 Pfam EamA-like transporter family 8 140 IPR000620 GO:0016020|GO:0016021
Mtr3g3310 363 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Mtr3g3310 363 PANTHER WAT1-RELATED PROTEIN 7 341 IPR030184 GO:0016021|GO:0022857
Mtr3g3310 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3310 Mtr-Chr3 47064949 47067042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3310 1 259 Nodulin-like Gene Family AT5G64700 49.057 3.95e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3310 - - vun:114162763 434.106