Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3298 ATGAAACCCTTGTATAGCACAAACACTCTCTTACTCCTCCTTTCACTATTCCTCCTCCACTTAGCACCATACCTTTCTGCTTCATCTTCTCAAAGAGACCCAACTTCACAACTTCTCAACTTTAAACAATCTCTCCCAAACCCATCTCTTCTCCATAACTGGCTCCCAAATAATAACCCATGTTCATTCACTGGTATCACCTGCAACCAAACCACCATAACTTCTATAGACCTCACCTCAATCCCTCTCAACACCAACCTCACCACCATCACAACCTATCTCCTCACCCTCCCTCACCTCCAAATCCTCACCCTCAAATCCACTAACATCACATCCTCACCACCCATTCCTCTCACCCACACCAAGTGCACCACCACCCTCACCACACTAGATCTATCACTAAACACACTCTCTTCATCTTTCTCAGACCTCTCCTTCCTCTCCACATGCTTAAGCCTCAAGTCCCTCAACCTCTCCAACAACGACCTCCAATTCGATTCTCCTAAATGGGGTCTTGCTTCATCTCTTAAATCTCTCGACCTCTCTGAAAACAAAATCAACGGTCCAAATTTCTTCCACTGGATCCTCAACCATGATTTAGAGCTTTTATCTCTCAGAGGTAACAAAATCACCGGTGAAATCGACTTCTCCGGCTACAACAATCTCCGTCACTTAGACATATCTTCCAACAATTTCTCTGTTTCAATTCCATCCTTTGGTGAATGTTCATCTCTACAGTACCTCGATATTTCAGCAAACAAGTACTTCGGTGACATTTCAAGAACACTATCACCTTGTAAGAATCTTCTTCATCTCAACGTTTCTGGTAACCAGTTCACCGGTCCGGTACCTGAACTTCCCTCCGGTTCGTTGAAGTTTCTTTATCTTGCTGCAAATCACTTCTTCGGAAAAATACCGGCGCGTTTAGCTGAGCTTTGTTCGACTCTCGTGGAGCTTGATCTTTCATCTAATAATCTCACCGGTGATATCCCACGCGAGTTTGGCGCGTGTACTTCGTTGACATCGTTTGATATTTCGAGCAACACCTTCGCCGGTGAACTTCAGGTGGAGGTTTTATCGGAGATGAGTAGTTTGAAAGAGCTTTCGGTGGCGTTTAACGACTTTGTGGGCCCAGTTCCCGTGTCACTGTCGAAGATAACGGGTTTGGAATTGTTAGATCTGAGTTCGAATAACTTCACCGGAACGATTCCGAAGTGGCTTTGTGAAGAAGAGTTTGGGAATAATTTGAAGGAACTTTACCTGCAAAATAACGGTTTCACGGGTTTTATTCCACCAACGCTAAGTAACTGTTCAAATCTCGTTGCTCTTGATTTGAGTTTCAATTATCTAACTGGAACCATTCCTCCAAGTCTGGGTTCTCTTTCGAAGCTTCGTGATTTAATCATGTGGTTGAATCAGCTTCATGGGGAAATTCCTCAAGAGCTTGGAAATATGGAGAGTTTAGAGAATTTGATTCTTGATTTCAATGAGTTGAGTGGAGGTATTCCATCTGGGTTGGTGAATTGCAGTAAGTTGAATTGGATCTCGTTGTCGAATAACAGGCTTGGTGGTGAGATTCCGGCATGGATTGGGAAGCTTTCGAATTTGGCTATTTTGAAGCTGAGTAATAATTCTTTCTCCGGTAGGGTTCCACCGGAGTTAGGAGATTGCCCTAGCTTGTTATGGTTGGATCTGAATACAAATTTACTCACAGGAACAATACCACCGGAGTTGTTCAAGCAGTCGGGGAAAGTCACGGTGAATTTCATTAACGGGAAGACGTATGTTTACATTAAGAATGATGGAAGTAGAGAGTGTCATGGAGCTGGGAACTTGCTGGAGTTTGCAGGGATTAGTCAGAAAAAATTGAACAGAATTTCAACGAAGAACCCTTGCAATTTCACTAGGGTTTATGGAGGTAAGCTTCAGCCAACGTTTACCACTAATGGTTCAATGATCTTTTTGGATATTTCACACAACATGTTGTCTGGTACTATTCCTAAGGAAATTGGTGAAATGCACTATCTCTATATTTTGCATTTGAGTTATAATAACTTGTCTGGTAGCATTCCTCAAGAGCTTGGTACGATGAAGAATCTCAACATTCTTGATCTTTCATACAATATGCTACAAGGTCAAATTCCACAAGCCTTGGCAGGGCTTTCCCTGCTCACTGAGATTGACTTGTCCAACAATTTTCTCTACGGGTTAATTCCGGAATCCGGTCAATTTGACACTTTTCCGCCTGTTAAGTTTCTGAACAATTCTGGTCTCTGCGGGGTTCCTCTTCCTCCGTGTGGGAAAGACACCGGTGCTAATGCTGCACAACACCAGAAGTCTCATAGGAGACAGGCATCCCTTGTAGGGAGTGTGGCAATGGGATTGCTTTTCTCACTTTTCTGCGTTTTCGGTTTGATCATTATTGCTATTGAGACAAGAAAGAGGAGAAAGAAAAAGGAGGCTGCCATTGATGGCTACATTGACAATTCTCATTCTGGTAATGCCAATAATTCTGGCTGGAAGCTGACCAGTGCCCGCGAAGCTCTCAGCATAAACCTTGCAACGTTTGAAAAGCCCCTCCGAAAGCTCACTTTCGCGGATCTTCTAGAGGCAACCAATGGCTTTCACAACGATAGTCTCATTGGTTCCGGTGGTTTCGGTGATGTGTATAAAGCTCAGCTGAAAGATGGAAGTGTTGTGGCCATCAAGAAACTAATACATGTAAGTGGACAAGGGGACAGGGAATTCACAGCAGAGATGGAAACCATTGGCAAAATCAAGCACAGAAACCTTGTTCCTCTTCTGGGATACTGCAAGGTTGGAGAGGAAAGATTGTTGGTCTATGAGTACATGAAATATGGAAGTCTAGAAGATGTCCTGCATGACCCAAAGAAAGCTGGGCTCAAGATGAATTGGTCAGTGAGGAGGAAGATTGCAATTGGAGCTGCAAGAGGATTGGCTTTTCTTCACCATAGTTGTATCCCACACATCATTCATAGAGACATGAAATCAAGCAATGTGTTGCTTGATGAAAATTTGGAAGCAAGGGTCTCTGATTTTGGAATGGCTAGGATGATGAGTGCTATGGATACTCATTTAAGTGTAAGCACTTTGGCAGGCACACCGGGTTATGTTCCCCCAGAATACTATCAGAGCTTTAGATGCTCCACTAAAGGTGATGTTTATAGTTATGGAGTAGTTTTGTTGGAGTTGCTGACGGGGAGAAGACCGACGGACTCGGCTGATTTTGGCGATAACAATCTTGTTGGATGGGTTAAACAACATGCCAAACTTAAAATAAGTGATGTTTTTGATCCAGAGCTAATGAAAGAAGACCCCAATATGGAGATTGAGCTTTTGCAACATTTAAAGGTAGCCTGTGCTTGTTTGGATGATAGACCTTGGCGGCGACCTACAATGATTCAAGTCATGGCAATGTTCAAGGAAATACAAGCAGGTTCTGGGATGGATTCTCAAAGTACTATAGCCACTGAAGATGAAGGTTTCAACGCCGTTGAGATGGTTGAAATGAGCATTAAAGAAGTCCCTGAATTAACCAAGCATTAG 3567 0.432 MKPLYSTNTLLLLLSLFLLHLAPYLSASSSQRDPTSQLLNFKQSLPNPSLLHNWLPNNNPCSFTGITCNQTTITSIDLTSIPLNTNLTTITTYLLTLPHLQILTLKSTNITSSPPIPLTHTKCTTTLTTLDLSLNTLSSSFSDLSFLSTCLSLKSLNLSNNDLQFDSPKWGLASSLKSLDLSENKINGPNFFHWILNHDLELLSLRGNKITGEIDFSGYNNLRHLDISSNNFSVSIPSFGECSSLQYLDISANKYFGDISRTLSPCKNLLHLNVSGNQFTGPVPELPSGSLKFLYLAANHFFGKIPARLAELCSTLVELDLSSNNLTGDIPREFGACTSLTSFDISSNTFAGELQVEVLSEMSSLKELSVAFNDFVGPVPVSLSKITGLELLDLSSNNFTGTIPKWLCEEEFGNNLKELYLQNNGFTGFIPPTLSNCSNLVALDLSFNYLTGTIPPSLGSLSKLRDLIMWLNQLHGEIPQELGNMESLENLILDFNELSGGIPSGLVNCSKLNWISLSNNRLGGEIPAWIGKLSNLAILKLSNNSFSGRVPPELGDCPSLLWLDLNTNLLTGTIPPELFKQSGKVTVNFINGKTYVYIKNDGSRECHGAGNLLEFAGISQKKLNRISTKNPCNFTRVYGGKLQPTFTTNGSMIFLDISHNMLSGTIPKEIGEMHYLYILHLSYNNLSGSIPQELGTMKNLNILDLSYNMLQGQIPQALAGLSLLTEIDLSNNFLYGLIPESGQFDTFPPVKFLNNSGLCGVPLPPCGKDTGANAAQHQKSHRRQASLVGSVAMGLLFSLFCVFGLIIIAIETRKRRKKKEAAIDGYIDNSHSGNANNSGWKLTSAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKAGLKMNWSVRRKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDENLEARVSDFGMARMMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNMEIELLQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGMDSQSTIATEDEGFNAVEMVEMSIKEVPELTKH* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3298 1188 Pfam Protein kinase domain 875 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3298 1188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 997 1009 IPR008271 GO:0004672|GO:0006468
Mtr3g3298 1188 Pfam Leucine rich repeat 415 473 IPR001611 GO:0005515
Mtr3g3298 1188 Pfam Leucine rich repeat 676 732 IPR001611 GO:0005515
Mtr3g3298 1188 Pfam Leucine rich repeat 511 570 IPR001611 GO:0005515
Mtr3g3298 1188 ProSiteProfiles Leucine-rich repeat profile. 126 148 IPR001611 GO:0005515
Mtr3g3298 1188 ProSiteProfiles Protein kinase domain profile. 875 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3298 1188 Pfam Leucine rich repeat N-terminal domain 37 69 IPR013210 -
Mtr3g3298 1188 Gene3D Ribonuclease Inhibitor 38 766 IPR032675 -
Mtr3g3298 1188 PANTHER SYSTEMIN RECEPTOR SR160 12 1162 - -
Mtr3g3298 1188 Pfam Leucine Rich repeats (2 copies) 221 260 IPR025875 -
Mtr3g3298 1188 Pfam Leucine Rich repeat 313 329 IPR001611 GO:0005515
Mtr3g3298 1188 ProSiteProfiles Leucine-rich repeat profile. 221 243 IPR001611 GO:0005515
Mtr3g3298 1188 SMART LRR_typ_2 485 509 IPR003591 -
Mtr3g3298 1188 SMART LRR_typ_2 533 557 IPR003591 -
Mtr3g3298 1188 SMART LRR_typ_2 721 744 IPR003591 -
Mtr3g3298 1188 SMART LRR_typ_2 97 120 IPR003591 -
Mtr3g3298 1188 SMART LRR_typ_2 697 720 IPR003591 -
Mtr3g3298 1188 SMART LRR_typ_2 386 410 IPR003591 -
Mtr3g3298 1188 SMART LRR_typ_2 558 581 IPR003591 -
Mtr3g3298 1188 SUPERFAMILY Protein kinase-like (PK-like) 861 1153 IPR011009 -
Mtr3g3298 1188 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 1162 - -
Mtr3g3298 1188 SMART serkin_6 875 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3298 1188 Gene3D Transferase(Phosphotransferase) domain 1 951 1152 - -
Mtr3g3298 1188 Pfam Brassinosteroid receptor island domain 583 647 IPR045381 -
Mtr3g3298 1188 SUPERFAMILY RNI-like 318 739 - -
Mtr3g3298 1188 Gene3D - 588 648 - -
Mtr3g3298 1188 CDD STKc_IRAK 881 1150 - -
Mtr3g3298 1188 Gene3D Phosphorylase Kinase; domain 1 836 950 - -
Mtr3g3298 1188 ProSitePatterns Protein kinases ATP-binding region signature. 881 904 IPR017441 GO:0005524
Mtr3g3298 1188 SUPERFAMILY RNI-like 64 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3298 Mtr-Chr3 46896789 46900909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3298 26 1184 Receptor kinase-like Gene Family AT4G39400 67.491 0.0 1512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mtr3g3298 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3298 K13415 - gmx:100499629 1794.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3298 3 46896789 46900909 Mtr3g3298 3 46896789 46900909 ECH