Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3297 ATGTCAACAACAAATATTGTTAATCACCACAGCTTGTTTGATCAAGAGCAAGATCATGAGATCCCTATGCAAATGGGGTTCAATATTCCTTTCCCTCCAAACATGACCTTACCTCCTTTGGATAATTGCCATCATCAATCTTTGAAAGGTATAAGTGCAATAACACCTTCATCACTTTCTCCTGAAGCTGCAAATTTTGCTGAAACCCTCCTTGCAACAGCTGTTCAAAAAACACGAGAATTTGATGATCATCTTACTTCTAGTTTTGGAGGAGGAGGCCAACTCCTTTCTTTGAACAGATCCAAAGTGAATTCATGGGCATGGGGAGAAGTAACTGGTAGCTTGATTGGAAAAAGAAGTAGTGGAGGAGATGATCAACATCATCATCATCATAATCAACAACTAGGGGTTTCTGCAATAAAGATGAAGAAAATGAAGGGAAGAAGAAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACTATGAGCGACGTGGATGTGTTGGACGATGGTTACAAGTGGAGGAAGTACGGACAGAAAGTGGTCAAGAACACACAGCATCCAAGAAGCTACTACCGTTGCACACAAGATAATTGTCGAGTAAAGAAACGTGTGGAGCGGTTGGCTGAGGATCCAAGAATGGTGATAACCACATATGAAGGAAGACATGCTCACTCTCCATCAAATGAACTTGAAGAATCACAAACTCAGTCTGAACTAACTAATTTCTTCTGGTAG 735 0.4109 MSTTNIVNHHSLFDQEQDHEIPMQMGFNIPFPPNMTLPPLDNCHHQSLKGISAITPSSLSPEAANFAETLLATAVQKTREFDDHLTSSFGGGGQLLSLNRSKVNSWAWGEVTGSLIGKRSSGGDDQHHHHHNQQLGVSAIKMKKMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNELEESQTQSELTNFFW* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3297 244 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 42 237 - -
Mtr3g3297 244 MobiDBLite consensus disorder prediction 229 244 - -
Mtr3g3297 244 SMART WRKY_cls 167 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3297 244 Pfam WRKY DNA -binding domain 168 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3297 244 SUPERFAMILY WRKY DNA-binding domain 159 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g3297 244 MobiDBLite consensus disorder prediction 221 244 - -
Mtr3g3297 244 Gene3D WRKY domain 154 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g3297 244 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 237 IPR044810 GO:0003700
Mtr3g3297 244 ProSiteProfiles WRKY domain profile. 162 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3297 Mtr-Chr3 46876665 46879373 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3297 45 244 WRKY Transcription Factor Family AT4G39410 49.393 2.66e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr3g3297 WRKY 6.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3297 - - gmx:100799241 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3297 3 46876665 46879373 Mtr3g3297 3 46876665 46879373 ECH