Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3295 ATGGCTGGAGCCGAATTCTCCATAGGTGCGCTTTGTTTAATAGTTCTTCTAGCTTATGGTACCCTACATTGTGTCCAAGGGGCAGATTCTATACCAGGTCTTGGTATTAATTGGGGTGCTCTTGCATCAAACCCTATGGATCCTAATATTGTTGCAAATATGTTGAAGGACAATGGAATCAAGAAGGTGAAACTTTTCGATGCAGATCCTTGGATCGTTAGTGCTTTTTCCGGAGACTTTGAAGTCATGGTTGGAATTCCTAATGATCAACTAAGTAAATTTGCTGGAAGTCTTGGAGATGCCGAAGATTGGGTAAAAGAAAATCTCACCAAACATCTTCACAACGGGGGCGTGAATATCAGATATGTAGCAGTTGGAAACGAACCATTCTTGACAAGCTACGGTGATAAATATGTGAAGAAAACATTTCCAGCTATGCAAAACATTCAAAAGGCTATTGATAAAGCTGGACATGGAGAAGTGAAGGTGACGACAGCTTTGAATGCAGATGTTTATGAATCTCAAACAAACAAACCGTCGGATGGAGATTTTCGAGACAACATTCGTGATGTTATGAAACAAATTATCCAATTTCTTCACGAAAAGAAGTCGCCGTTTCTTGTCAACATTTACCCTTTCCTTAGTCTATATCAAAGTGAAGGTTTTCCAGAAGATTTTGCATTCTTTGGTACCCATAGCATGACAATTAGTGACAAAAATGCACAATATAGCAATGTCTTTGATGCAAATTTAGATACACTTGCTTGGGCATTAAAAAAGTCTGGTTACTCTGACATAAAAATTGTTGTTGGTGAAATTGGTTGGCCAACTGATGGTAATAAAAATGCTAATGTTAACAATGCAAAAAGATTTTACCAAGGGTTTCTTAAAAATATGGCTAGCAAAAAGGGTACTCCAATGCTCCCCGGACATATGGATGCATATCTATTTTCTCTTTTTGACGAGAATTTAAAGAGTATTGATCCTGGTAATTTTGAACGTCATTGGGGAATTTATCGCTACGATGGAAAGCCGAAGTTTCCTATAGATTTTTCTGGTAAAGGAGAAGAAAAATTGCCACAATCAGCGAAGGGTGTTCGATACCAAGAACATAAATGGTGTGTCCTAAATGCAGATGTTAAGAATATGTCTTTGATCCCGCCGGCATTAGACTATGCTTGTGCTGGTGCTGACTGTACAAGTTTAGGATATGGTTGTTCTTGTGGAAATTTGGGATTAGCTGGTAATGCATCTTTTGCTTTTAACCAGTTTTTTCAAACTAGAGACCAAAGTGTTGAAGCATGCGATTTCAATGGATTGGGTAGTATTGTTACACAGGATCCATCAAAGGGAACTTGTTTGTTCCCTATAGAACTTGAGAGCAATAATGGAGATATGCTAACAACAATGCGTATTATGGCAAGCATGTTGATTGGATTGTCGATATTTTTTATAACATTATGA 1464 0.3784 MAGAEFSIGALCLIVLLAYGTLHCVQGADSIPGLGINWGALASNPMDPNIVANMLKDNGIKKVKLFDADPWIVSAFSGDFEVMVGIPNDQLSKFAGSLGDAEDWVKENLTKHLHNGGVNIRYVAVGNEPFLTSYGDKYVKKTFPAMQNIQKAIDKAGHGEVKVTTALNADVYESQTNKPSDGDFRDNIRDVMKQIIQFLHEKKSPFLVNIYPFLSLYQSEGFPEDFAFFGTHSMTISDKNAQYSNVFDANLDTLAWALKKSGYSDIKIVVGEIGWPTDGNKNANVNNAKRFYQGFLKNMASKKGTPMLPGHMDAYLFSLFDENLKSIDPGNFERHWGIYRYDGKPKFPIDFSGKGEEKLPQSAKGVRYQEHKWCVLNADVKNMSLIPPALDYACAGADCTSLGYGCSCGNLGLAGNASFAFNQFFQTRDQSVEACDFNGLGSIVTQDPSKGTCLFPIELESNNGDMLTTMRIMASMLIGLSIFFITL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3295 487 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 4 463 - -
Mtr3g3295 487 Pfam X8 domain 372 441 IPR012946 -
Mtr3g3295 487 Gene3D - 368 463 - -
Mtr3g3295 487 SMART X8_cls 372 455 IPR012946 -
Mtr3g3295 487 SUPERFAMILY (Trans)glycosidases 34 351 IPR017853 -
Mtr3g3295 487 Pfam Glycosyl hydrolases family 17 34 351 IPR000490 GO:0004553|GO:0005975
Mtr3g3295 487 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 4 463 IPR044965 GO:0004553|GO:0005975
Mtr3g3295 487 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Mtr3g3295 487 Gene3D Glycosidases 33 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3295 Mtr-Chr3 46852460 46854419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3295 9 465 Miscellaneous Gene Families AT5G64790 50.763 1.22e-175 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3295 - - gmx:100794658 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0877 1 10138718 10147640 Mtr3g3295 3 46852460 46854419 PCT