Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3294 ATGGACATGTATTTTGGAAACCCTAATTCTAACCCTTATCACAATAATAATATATCTCCTCCTCCTCCTTTCTCGTCTGATTTCATTAATTTATCTGATTATCTGGTGCTGGATGATGAACATCAAGAATGTTGGTCACAAAGTACAGGAACTGAATCATCAGACAACAAGGCACCTTCCACCACCATTGATATTAATGTCATCAATCAAGGATTAATTTGTGATGAAATTGAAACCTCTACCAACAACAACAATAACATGATGAAACGTAAAAGCGGGGTGATGAAGGAAAATACAGTAGATGTGAGCCCAAGGGTTACGTTTAGAACGAGATCGCAGCTTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCTGTCAAGAATAGTCCATACCCAAGGAACTACTACAAGTGTTCAGGTGAAAGATGTGGTGTTAAGAAAAGGGTGGAAAGGGATAGGGAAGATTCAAGCTATGTGTTAACAAGCTATGAAGGTGTTCACAATCACGAAAGCCCCTGCAATTCATACTGCACCCCAGTGTCTTTGGTGTATTCCAATGAATGGCCACAGCAGAACCCTTCTGCAACCTCTTCTTCCAATTAA 618 0.3964 MDMYFGNPNSNPYHNNNISPPPPFSSDFINLSDYLVLDDEHQECWSQSTGTESSDNKAPSTTIDINVINQGLICDEIETSTNNNNNMMKRKSGVMKENTVDVSPRVTFRTRSQLEIMDDGYKWRKYGKKSVKNSPYPRNYYKCSGERCGVKKRVERDREDSSYVLTSYEGVHNHESPCNSYCTPVSLVYSNEWPQQNPSATSSSN* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3294 205 ProSiteProfiles WRKY domain profile. 112 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3294 205 Gene3D WRKY domain 104 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g3294 205 SUPERFAMILY WRKY DNA-binding domain 109 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g3294 205 Pfam WRKY DNA -binding domain 118 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3294 205 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 178 IPR044810 GO:0003700
Mtr3g3294 205 SMART WRKY_cls 117 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3294 205 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 20 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3294 Mtr-Chr3 46847949 46849934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3294 97 196 WRKY Transcription Factor Family AT5G64810 59.406 6.96e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr3g3294 WRKY 8.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3294 - - gmx:732584 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3294 3 46847949 46849934 Mtr3g3294 3 46847949 46849934 ECH
Mtr1g0206 1 2355122 2361475 Mtr3g3294 3 46847949 46849934 PCT