Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3278 ATGAATCCTCCACCGTACTTCTTCCTCCTCCTCCTCATTTTTCTCTCTTCTTGCTCCGCCACTTCACCGGAGCTCCGATCTCTACTCGAATTCAAAAAAGCCATAACTTCAGATCCAGAAAATCCACCTCTCACTTCATGGAACCTTTCTTCTCTCCGAAACGACAACATATGTCCACGTTCATGGACAGGAATCACCTGCGACGACCTCACCGGAAACGTCACCGGAATTAACCTCAACAACTTCAACCTCGCCGGAGAGTTAAAATTTCAAACACTCCTCGACCTCAAACTTCTCAAAAATCTCAGCCTCGCCGGAAACAGCTTCAGTGGAAGATTACCACCGTCGTTAGGTACAATTACTTCTCTTCAACATTTGGATCTTTCAAACAACAAATTCTACGGTCCAATTCCGGCGCGGATCAACGATCTTTGGGGTTTGAATTACCTCAATTTTTCACATAACAATTTCAAAGGTGGTTTTCCAGCTCAACTCAATAATCTTCAACAGCTTAGGGTTTTAGATTTGCACTCTAACAATTTCTGGGCTAGCATTGCTGAATTAATTCCGACTCTTCACAACGTCGAGTTTCTCGATTTGAGTCTAAATCAATTCTCTGGTGCACTTTCACTTACTCTTGAGAATGTTTCATCTTTGGCGAATACTGTTCGGTATTTGAACTTGAGTTATAACAAATTGAACGGTGAATTTTTCTTAAACGATTCAATTGCATTGTTTCGAAACTTGCAAACTCTGGATTTGAGTGGTAATTTGATTAGAGGAGAGCTTCCTTCTTTTGGTTCATTGCCTGGACTTCGAGTTTTGAGACTAGCGCGTAATCTGTTCTTTGGCGCTGTGCCTGAGGATTTGTTGCTGAGTTCAATGTCATTGGAGGAATTGGATCTTAGCCACAATGGATTTACAGGCTCAATTGCTGTAATTAATTCCACCACTTTAAATGTATTGGATCTTTCATCAAATAGTTTATCAGGCTCACTGCCAACCTCTTTGAGAAGATGCACAGTCATAGATTTGAGCAGGAATATGTTTACTGGCGACATTTCTGTATTAGGGAACTGGGAAGACACTATGGAGGTTGTTGATCTGAGTTCAAACAAGCTGTCTGGATCCGTGCCTTCTATTATAGGGACATATTCAAAATTGTCTACCCTTGATTTAAGTTTTAATGAACTTAATGGATCCATTCCTGTTGGTTTGGTTACTTCACAATCGCTAACAAGACTGAATCTTTCTGGAAATCAATTTACAGGGCCACTTTTGCTTCAAGGTTCAGGGGCAAGTGAATTACTAATTTTGCCTCCTTTTCAGCCAATGGAATATTTTGATGTATCTAACAACTCGTTAGAAGGTGTCTTACCTTCTGATATAGATAGAATGGTTAAGCTCAAAATGCTGAATCTAGCAAGGAATGGCTTTTCCGGACAGCTTCCAAATGAATTGAGCAAACTTATTGATTTGGAGTACCTCAATTTGTCTAACAACAAATTTACCGGAAAAATTCCTGATAAGCTTTCATTTAACTTGACTGCGTTTAATGTGTCCAATAATGATCTATCTGGCCATGTTCCAGAAAATTTACGGCGGTTTCCTCCTTCATCTTTTTACCCTGGAAATGAAAAGCTAAAGTTACCAGATAATGCCCCAGAACATTCTGCACTGCCAAATATTCCAGATAAAGATAAACATCATAGTTCAAAGGGTAATATCAGGATAGCAATTATCCTTGCTTCTGTGGGTGCTGCTGTGATGATTGCTTTTGTTTTATTGGCTTATCATCGAACACAAGCAAAAGAATTTCGTGGGAGAAGTGATTTTGCTGGCCAAACTACTGGAAGAGATGTCAAGTTAGCAGGACTTTCAAGGCCTTCCCTCTTCAAGTTCAATACAAATGCTCAACCCCCAACATCTTCGTTGAGCTTTTCAAATGATCACTTATTGACATCCAATTCAAGATCACTTTCTGGACCACAGTCAGAGTTTATAACCGAAATTTCTGAGCACGGCTTGCCGCAGGAAGTGGTAGCAACCAGTTCAGCACCTCCTAATTTGATGGATAACCCTCCCATGTCATCTGGAAGGAAGTCTTCTCCTGGTTCCCCATTGTCGTCCTCACCACGCTTTATCGAGGCTTGTGAAAAGCCTGTGATGTTGGACGTATACTCACCAGATCGACTAGCTGGGGAACTGTTTTTCCTGGATTCTTCACTAGCATTCACTGCAGAGGAGTTATCTCGAGCTCCGGCTGAAGTTCTTGGTAGAAGTAGCCACGGCACTCTGTACAAAGCTACTCTGGACAATGGTCATATGTTGACTGTAAAATGGTTAAGAGTGGGGTTGGTCAAACATAAAAAGGAATTTGCGAGAGAAGTTAAAAAGATCGGTTCGATGAGGCATCCAAACATTGTCCCATTACGAGCATACTATTGGGGGCCTAGGGAACAGGAGAGGCTTCTTTTAGCTGACTACATTCATGGAGACAACTTGGCCCTCCATCTCTATGAGACCACTCCCCGGAGATACTCGCCATTGTCATTCAGCCAGAGAATAAGAGTTGCAGTTGAAGTTGCTAGATGTCTTTTATACCTTCATGATCGAGGGCTTCCCCATGGAAATCTGAAGCCGACAAATATTCTGTTAGCAGGCCCTGATTACAGTGTTTCTCTTACTGACTACGGTCTGCACCGGCTAATGACACCGGCTGGAGTTGCAGAGCAGATACTAAATCTAGGAGCACTCGGATACCGCGCTCCAGAACTTGCTTCTGCATCCAAACCACTTCCATCATTTAAGGCCGATGTTTATGCACTTGGGGTGATCCTAATGGAATTATTAACGAGGAAAAGTGCAGGCGACATAATATCTGGGCAATCAGGTGCTGTTGATCTTACAGATTGGGTTAGGCTGTGTGAGAGAGAAGGAAGGGTAATGGACTGTATAGACAGAGACATTGCAGGTGGTGAAGAATCCTCTAAAGAGATGGACCAACTGCTTGCGACATCTCTCAGGTGTATTCTCCCTGTACATGAAAGGCCTAACATCAGACAAGTTTTTGAAGATCTCTGTTCCATACCATCGGCTTGA 3102 0.4226 MNPPPYFFLLLLIFLSSCSATSPELRSLLEFKKAITSDPENPPLTSWNLSSLRNDNICPRSWTGITCDDLTGNVTGINLNNFNLAGELKFQTLLDLKLLKNLSLAGNSFSGRLPPSLGTITSLQHLDLSNNKFYGPIPARINDLWGLNYLNFSHNNFKGGFPAQLNNLQQLRVLDLHSNNFWASIAELIPTLHNVEFLDLSLNQFSGALSLTLENVSSLANTVRYLNLSYNKLNGEFFLNDSIALFRNLQTLDLSGNLIRGELPSFGSLPGLRVLRLARNLFFGAVPEDLLLSSMSLEELDLSHNGFTGSIAVINSTTLNVLDLSSNSLSGSLPTSLRRCTVIDLSRNMFTGDISVLGNWEDTMEVVDLSSNKLSGSVPSIIGTYSKLSTLDLSFNELNGSIPVGLVTSQSLTRLNLSGNQFTGPLLLQGSGASELLILPPFQPMEYFDVSNNSLEGVLPSDIDRMVKLKMLNLARNGFSGQLPNELSKLIDLEYLNLSNNKFTGKIPDKLSFNLTAFNVSNNDLSGHVPENLRRFPPSSFYPGNEKLKLPDNAPEHSALPNIPDKDKHHSSKGNIRIAIILASVGAAVMIAFVLLAYHRTQAKEFRGRSDFAGQTTGRDVKLAGLSRPSLFKFNTNAQPPTSSLSFSNDHLLTSNSRSLSGPQSEFITEISEHGLPQEVVATSSAPPNLMDNPPMSSGRKSSPGSPLSSSPRFIEACEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDNGHMLTVKWLRVGLVKHKKEFAREVKKIGSMRHPNIVPLRAYYWGPREQERLLLADYIHGDNLALHLYETTPRRYSPLSFSQRIRVAVEVARCLLYLHDRGLPHGNLKPTNILLAGPDYSVSLTDYGLHRLMTPAGVAEQILNLGALGYRAPELASASKPLPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDQLLATSLRCILPVHERPNIRQVFEDLCSIPSA* 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3278 1033 SUPERFAMILY Protein kinase-like (PK-like) 755 1027 IPR011009 -
Mtr3g3278 1033 ProSiteProfiles Leucine-rich repeat profile. 248 270 IPR001611 GO:0005515
Mtr3g3278 1033 PANTHER OS07G0626500 PROTEIN 10 1029 - -
Mtr3g3278 1033 SMART LRR_typ_2 490 514 IPR003591 -
Mtr3g3278 1033 SMART LRR_typ_2 120 144 IPR003591 -
Mtr3g3278 1033 SMART LRR_typ_2 269 293 IPR003591 -
Mtr3g3278 1033 SMART LRR_typ_2 246 268 IPR003591 -
Mtr3g3278 1033 SMART LRR_typ_2 168 192 IPR003591 -
Mtr3g3278 1033 SUPERFAMILY RNI-like 77 427 - -
Mtr3g3278 1033 Gene3D Ribonuclease Inhibitor 24 186 IPR032675 -
Mtr3g3278 1033 Gene3D Ribonuclease Inhibitor 291 555 IPR032675 -
Mtr3g3278 1033 ProSiteProfiles Protein kinase domain profile. 752 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3278 1033 MobiDBLite consensus disorder prediction 683 712 - -
Mtr3g3278 1033 Pfam Leucine Rich repeat 409 424 IPR001611 GO:0005515
Mtr3g3278 1033 Pfam Leucine Rich repeat 247 262 IPR001611 GO:0005515
Mtr3g3278 1033 Pfam Leucine Rich repeat 294 311 IPR001611 GO:0005515
Mtr3g3278 1033 Pfam Leucine rich repeat N-terminal domain 23 68 IPR013210 -
Mtr3g3278 1033 Pfam Leucine Rich Repeat 493 511 IPR001611 GO:0005515
Mtr3g3278 1033 Gene3D Phosphorylase Kinase; domain 1 733 829 - -
Mtr3g3278 1033 SUPERFAMILY L domain-like 441 539 - -
Mtr3g3278 1033 PANTHER OS07G0626500 PROTEIN 10 1029 - -
Mtr3g3278 1033 Pfam Protein kinase domain 756 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3278 1033 MobiDBLite consensus disorder prediction 683 710 - -
Mtr3g3278 1033 MobiDBLite consensus disorder prediction 551 570 - -
Mtr3g3278 1033 Gene3D Ribonuclease Inhibitor 187 290 IPR032675 -
Mtr3g3278 1033 Gene3D Transferase(Phosphotransferase) domain 1 831 1033 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3278 Mtr-Chr3 46670614 46675941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3278 24 1031 Receptor kinase-like Gene Family AT5G65700 26.959 1.13e-68 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr3g3278 Pkinase 2.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3278 - - gmx:100802768 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3278 3 46670614 46675941 Mtr3g3278 3 46670614 46675941 ECH