Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3275 ATGGCTCCTTTAAGTTGTTCTAGAATAACAATGTTCAGTTTGGTTCTATTTGTCCTCATAATAGGGAGTGTCAATGCACAACTCTCTACAAACTTTTACTCAAAAACTTGTCCCAAACTCTCTTCCATTGTCCAACGTCAAGTGCAATCCGCCATATCAAAGGAGGCACGAATTGGTGCTTCTATCCTCCGCTTGTTCTTCCACGATTGCTTTGTCAATGGGTGCGATGGGTCAATTCTACTAGATGACACATCAAACTTTACCGGAGAGAAGAACGCACTCCCGAATAAGAACTCTGTTCGAGGATTCGATGTCATTGACAACATAAAGACGGCGGTAGAGAACGTATGCCCCGGAGTTGTATCATGTGCTGATATCCTTGCCATTGCTGCCACAGACTCCGTTGCAATTCTTGGTGGCCCAACCTGGAATGTAAAACTTGGAAGAAGAGATGCCACAACTGCTAGTCAATCTGATGCGAACACTGCCATCCCAAGACCAACTTCCAACCTTAATATACTCACCTCAATGTTTAAGAATGTTGGTCTTTCCACCAAGGACTTAGTCGCATTGTCAGGTGCTCACACAATTGGACAAGCAAGGTGCACAACATTTAGGGTACGAATCTACAATGAGACCAACATAGATACTTCTTTTGCTAGCACAAGGCAATCTAATTGCCCAAAGACATCAGGATCAGGGGACAACAATTTGGCACCTCTTGATCTCCATACTCCCACTTCTTTTGACAACTGCTACTACAGGAACCTTGTTCAAAACAAGGGTCTTCTTCATTCAGACCAACAACTTTTCAACGGCGGGTCCACTAACTCAATAGTGAGTGGCTATTTTAATAATCAAAACTCTTTTTTCTCTGATTTTGCCACTGCTATGATCAAGATGGGAGATATTAAGCCACTCACTGGATCAAATGGAGAGATTAGAAAGAACTGCAGAAAACCCAACTAA 969 0.4272 MAPLSCSRITMFSLVLFVLIIGSVNAQLSTNFYSKTCPKLSSIVQRQVQSAISKEARIGASILRLFFHDCFVNGCDGSILLDDTSNFTGEKNALPNKNSVRGFDVIDNIKTAVENVCPGVVSCADILAIAATDSVAILGGPTWNVKLGRRDATTASQSDANTAIPRPTSNLNILTSMFKNVGLSTKDLVALSGAHTIGQARCTTFRVRIYNETNIDTSFASTRQSNCPKTSGSGDNNLAPLDLHTPTSFDNCYYRNLVQNKGLLHSDQQLFNGGSTNSIVSGYFNNQNSFFSDFATAMIKMGDIKPLTGSNGEIRKNCRKPN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3275 322 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Mtr3g3275 322 Gene3D Peroxidase, domain 2 165 301 - -
Mtr3g3275 322 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 Gene3D - 31 319 - -
Mtr3g3275 322 ProSiteProfiles Plant heme peroxidase family profile. 27 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 PANTHER PEROXIDASE 7 320 - -
Mtr3g3275 322 PANTHER PEROXIDASE 72-RELATED 7 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3275 322 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Mtr3g3275 322 CDD secretory_peroxidase 27 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3275 Mtr-Chr3 46648763 46652837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3275 24 322 Peroxidase AT5G05340 72.910 3.67e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3275 K00430 - gmx:100803637 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3275 3 46648763 46652837 Mtr5g2846 5 37057970 37059040 ECH
Mtr3g3275 3 46648763 46652837 Mtr3g3275 3 46648763 46652837 ECH