Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3270 ATGGAAAGTGTAAGTAACATTGGTTTCTCTTCAACATTGAGAACTTCTTTGTACACAAAACTACTTTCAAAGCAGAGGAAACAAAAATCGCCATGCAGTTTTATGATTCCTCTCAACTACTCTATTAGGATGAACAAAATTTGCTGTACACTATCAGAAAGTGGGATTGAAGAGAATCCTACCAGCAAAAGGGTATCTAAATCTAATGATTTGATGGAAGAATACAATATAGCTATGAAAAAGATGATGAGGAACCCTTATGAGTATCATCACGATCTGGGTATGAATTATACAGTTATAACTGACAATTTGATTGTGGGGTCCCAACCACAGAAACCTGAAGATGTAGATCACCTTAAGAAGGAAGAAGGTGTGGCATATATTCTAAACTTGCAACAGGATAAGGATGCTGAGTTTTGGGGAATAGACTTGCAGTCAATAGTAAAAAAGTGTCGCGAACTTGAAATTAGACACATGAGGAGACCTGCAGTAGACTTTGATCCAAACTCTTTGCGAAGTGCACTACCTAAAGCAGTGTCATCCTTAGAATGGGCAATTTCTGAGGGAAAAGGAAGAGTTTATGTGCATTGTACTGCAGGACTTGGAAGAGCTCCAGCAGTGACAATTGCTTATTTGTTCTGGTTTTGTGACATGAATCTAAATGAAGCCTATGATATGCTAACTTCAAAGAGACCTTGTGGACCAAATAAAAGAGCAATACAAGGAGCAACTTATGATTTGGCTAAAAATGATCCATGGAAGGAGCCATTTGAGAGTCTTCCAGACCATGCTTTTGGGGATATAGCAGATTGGGAGAGGAACCTGATTCAAAACCGTGTCCGTGCTCTTCGTGGAACCTGA 861 0.3914 MESVSNIGFSSTLRTSLYTKLLSKQRKQKSPCSFMIPLNYSIRMNKICCTLSESGIEENPTSKRVSKSNDLMEEYNIAMKKMMRNPYEYHHDLGMNYTVITDNLIVGSQPQKPEDVDHLKKEEGVAYILNLQQDKDAEFWGIDLQSIVKKCRELEIRHMRRPAVDFDPNSLRSALPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVTIAYLFWFCDMNLNEAYDMLTSKRPCGPNKRAIQGATYDLAKNDPWKEPFESLPDHAFGDIADWERNLIQNRVRALRGT* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3270 286 SMART dsp_5 96 246 IPR020422 GO:0006470|GO:0008138
Mtr3g3270 286 Gene3D Protein tyrosine phosphatase superfamily 79 286 IPR029021 -
Mtr3g3270 286 ProSiteProfiles Dual specificity protein phosphatase domain profile. 96 253 IPR020422 GO:0006470|GO:0008138
Mtr3g3270 286 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 232 IPR000387 GO:0016311|GO:0016791
Mtr3g3270 286 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 2 286 - -
Mtr3g3270 286 Pfam Dual specificity phosphatase, catalytic domain 117 236 IPR000340 GO:0008138|GO:0016311
Mtr3g3270 286 CDD DSP_laforin-like 95 242 IPR045204 GO:0019203|GO:0046838
Mtr3g3270 286 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 2 286 - -
Mtr3g3270 286 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 238 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3270 Mtr-Chr3 46575892 46579325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3270 28 286 Protein tyrosine phosphatase (PTP) family AT3G10940 72.692 1.56e-141 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3270 - - gmx:100805592 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3270 3 46575892 46579325 Mtr3g3270 3 46575892 46579325 ECH