Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3253 ATGTCGTCGTTCCCGTTCCACCGTCGATCTCAATCGGAGGTACATTTCCGAATCCCCGACGATTTCGACCTCGAAATGGATCCCTTCGACTTCGACGCTTCTCCGCTCCAGTTCCAAGATCCACCACCACCTCAACACGACGATCTCCTTTCCTCTTACATCGATTCCGATAATTCCGGATCCAAACTCAATTCTCCAACCGCCGCTAATGCCGGTCACCGCCGTAGCAATTCCGCCGATACATCTTCTTCCTTGTTGTCTGAAGGAATCGAATCTAAGAAAGCTATGTCTCCTGATAAACTTGCTCAATTGTGGACAGTTGATCCTAAACGCGCCAAGAGGATTCTGGCAAATCGTCAATCTGCGGCTAGGTCCAAAGAGAGGAAAGCTTGTTATGTGGTTGAGCTTGAAAGGAAAATCCATACTCTTCAAACTGAAGCAACTACTCTTTCTGCTCAATTAAATCTTTTCCAGAGAGATACAACTGGTCTGTCGAGTGAAAATACCGAGTTGAAGCTTCGGTTACAAACCATGGAGCAACAAGCTAAGCTATGTGATGCTCTAAATGAAGCATTGAAGAACGAAGTTGATAGGCTCAAGCTTGCTACTGGAGAGGTACCAACCCATGCTGATACCTATGGTTTGGGAATGCATCAACTTTCATATTCTCAAGCTTCGTCCTTCATGCACCAGCCACAACATGGTTCAAACGAACTTAGGGCCATGCAAATGCAGCATTTTCATTCACTATCATCTAATGGATCCAATCCCCACCAGCCTCAGTTTGATCTACCCACTTCATATGATTTGTCAGAAATGTTGTCAAGTGATTCTATTGGCCAATTTCAGGGGCTGGACATTGGCAACAGGGTTTCTCATGTTCTGATGCCTGATGGTCCCTCTGTTTCTGTTAATAAAACCAACAACGCCTTTTGA 936 0.453 MSSFPFHRRSQSEVHFRIPDDFDLEMDPFDFDASPLQFQDPPPPQHDDLLSSYIDSDNSGSKLNSPTAANAGHRRSNSADTSSSLLSEGIESKKAMSPDKLAQLWTVDPKRAKRILANRQSAARSKERKACYVVELERKIHTLQTEATTLSAQLNLFQRDTTGLSSENTELKLRLQTMEQQAKLCDALNEALKNEVDRLKLATGEVPTHADTYGLGMHQLSYSQASSFMHQPQHGSNELRAMQMQHFHSLSSNGSNPHQPQFDLPTSYDLSEMLSSDSIGQFQGLDIGNRVSHVLMPDGPSVSVNKTNNAF* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3253 311 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 108 171 IPR004827 GO:0003700|GO:0006355
Mtr3g3253 311 CDD bZIP_plant_RF2 111 160 IPR044759 GO:0003700|GO:0006355
Mtr3g3253 311 MobiDBLite consensus disorder prediction 51 85 - -
Mtr3g3253 311 MobiDBLite consensus disorder prediction 27 85 - -
Mtr3g3253 311 SMART brlzneu 106 170 IPR004827 GO:0003700|GO:0006355
Mtr3g3253 311 Gene3D - 109 183 - -
Mtr3g3253 311 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 4 307 - -
Mtr3g3253 311 PANTHER BZIP TRANSCRIPTION FACTOR 18 4 307 - -
Mtr3g3253 311 Coils Coil 175 195 - -
Mtr3g3253 311 Pfam bZIP transcription factor 110 168 IPR004827 GO:0003700|GO:0006355
Mtr3g3253 311 Coils Coil 133 153 - -
Mtr3g3253 311 SUPERFAMILY Leucine zipper domain 110 164 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3253 Mtr-Chr3 46413580 46416861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3253 5 287 bZIP Transcription Factor Family AT2G40620 51.212 4.24e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr3g3253 bZIP_1 2.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3253 - - gmx:100807712 368.622