Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3244 ATGAATGTTATTTTACCTGAAACTGTCTCTGCCAAGAAAAAGAAGCTACTCATAAAAGAGCTTCTTCAGGGTAAAGAATATGCTACTCAGTTAAAACTTTTGCTTAAGAATCCTGTTTGTTCTGATGGGTCTCCTTCTGTTAAGGAATTGGTGACTAATGTGTTGAGATCTTTCTCTGAGACTATTTCTGTGATGAATTCTACTGAAGATTGTAGTTTAGATGTGAATGATTCAGGTTCATTGGTGGAAGCTGATGATTTGAAGTCTGAAGATACAAGTGAGAGTAAGAAGAGATTGTCGCCAACTACAAAGGATAGAAGAGGTTCCTACAAAAGAAGGAAGACAGATGAGACAAGGACCATAGTCTCTAAAACAATTGGTGACACTCATTCCTGGAGAAAGTACGGACAGAAGGAAATCCTCAATTCTAATTTCCCAAGGAGTTACTTCAGGTGCACCCGGAAGCATGATCAAGGTTGCAAAGCAACCAAACAGGTACAATTGATAGAAGAGAATCCAGAAATGTACCAAATTACATACATTGGCTTTCACACATGCAAATCCACTCTACACACTCCACAAATGGTCTCATTCTCTGAAGATACTAATTGGGATTCAATTCTTGTGAATTCTAATCCTCACTCAAAGGAGGTTCTAACAAATTATGATCAACAAGATTCACATGTTATTAGCTCAGAAAGGTCAATTGTGAAACAAGAATATCCCAACAACGACGACAGTACTACTCCGAGGAGTGATGTTACTGACAACTTATTGGATCCTAATTTGTGGTCTGATTTTAAGGATTTTGAACTCTCCAAGGATATTGTGTATTCCTGCACTGAATCTCAAAATCTTGAAATTGATTTTGGGGTGTTTTCTTCTGATTTCAGCAATGATTTGATATATTTTGATGAAAGTCATTTGCTTTAA 933 0.3687 MNVILPETVSAKKKKLLIKELLQGKEYATQLKLLLKNPVCSDGSPSVKELVTNVLRSFSETISVMNSTEDCSLDVNDSGSLVEADDLKSEDTSESKKRLSPTTKDRRGSYKRRKTDETRTIVSKTIGDTHSWRKYGQKEILNSNFPRSYFRCTRKHDQGCKATKQVQLIEENPEMYQITYIGFHTCKSTLHTPQMVSFSEDTNWDSILVNSNPHSKEVLTNYDQQDSHVISSERSIVKQEYPNNDDSTTPRSDVTDNLLDPNLWSDFKDFELSKDIVYSCTESQNLEIDFGVFSSDFSNDLIYFDESHLL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3244 310 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 5 287 - -
Mtr3g3244 310 MobiDBLite consensus disorder prediction 83 117 - -
Mtr3g3244 310 Pfam WRKY DNA -binding domain 128 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3244 310 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 287 IPR044810 GO:0003700
Mtr3g3244 310 Gene3D WRKY domain 113 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g3244 310 SUPERFAMILY WRKY DNA-binding domain 123 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g3244 310 ProSiteProfiles WRKY domain profile. 121 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3244 310 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3244 Mtr-Chr3 46330312 46332529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3244 12 220 WRKY Transcription Factor Family AT3G56400 44.651 6.53e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr3g3244 WRKY 1.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3244 - - gmx:100170683 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3244 3 46330312 46332529 Mtr5g2284 5 29956166 29960927 ECH
Mtr3g3244 3 46330312 46332529 Mtr3g3244 3 46330312 46332529 ECH