Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3237 ATGAAGCTACAACTATCTAATGTTTCTCTTGTTCTATTAATCTCCACACTGTCTCTCTTTGGCTTGATTGTATCTGCTGCTGACTTGAACTCTGACCGACAAGCTCTATTGGAGTTTGCTTCTGCTGTTCCACATGCTCCAAGGCTCAACTGGAACGAATCTTCTTCAATCTGTACCTCATGGGTTGGTGTGACTTGCAACTCAAATCATACTCGTGTCGTAGGTATCCATCTTCCAGGAATTGGACTAACCGGTTCGATTCCGGAGAACACAATAGGAAAACTAGATGCTCTAAGAGTTCTCAGTCTTCATTCCAATGGTCTTGGAGGGAACCTTCCTTCTAACATCCTCTCAATTCCTTCACTCCAATTTGCACACCTGCAGAAAAACAACTTCTCAGGTCTAATTCCTTCTTCTGTCTCTCCTAAACTAGTTGCATTGGATATTTCCTTTAACTCCTTCTCTGGAAGCATACCATCTGCATTTCAGAACCTTAGAAGACTCACTTGGTTTTATCTCCAAAACAATTCTATATCTGGACCTATCCCTGACTTCAACCTTCCAAGTCTCAAATACTTGAATTTGAGCAATAATAAATTGAATGGATCAATTCCAAATTCTATCAAAACATTCCCTTCTTCTGCTTTTGTCGGAAACTCTCTCTTATGTGGTCCACCTCTTCTTAATTATTGCTCTTCAATCTCCCCTTCTCCATCTCCTTCCCCTGCATCCACACAAATCCAGAAAGCTACTGTCGCTCATAAGAAAAGCTTTGGCGTAGCTGCTATACTTGCTTTAGTCATTGGAGGAATTGCATTCCTCTCTCTACTAGCTTTAGTGTTCTTTCTATGCTTTTTGAAGAAGAAAAACAATAAAAGAAGTGGCATTCTGAAAGGAAAATCTTCATCTTGTGCTGGAAAAGCTGAAGTTTCAAAGAGTTTTGGGAGTGGAGTGCAAGCTGCTGAAAAGAACAAGCTATTTTTCTTTGAAGGTTCATCTTATACCTTTGACCTTGAGGATTTACTAAAGGCCTCAGCTGAAGTTCTTGGAAAAGGGAGCTATGGTACAGCATACAAGGCTGTTTTGGAGGAGGGAGTGACAATGGTAGTTAAAAGGTTGAAGGAAGTTATGGTAGGAAAGAAGGAGTTTGAACAACAGTTGGATATTGTTGGGAGAATCGGACGCCATCCAAATGTTATGCCACTTCGAGCTTATTACTACTCCAAAGATGAGAAACTTTTGGTTTACAGTTACATGCCAGAAGGCAGCTTGTTTTTCTTGTTGCATGGAAACAAGGGTGCAGGAAGAACACCATTTGACTGGAATTCAAGAGTGAAGGTTGCACTTGGAGCAGCTAAAGGAATTGCTTTCATTCATACCGAAGGGGGCCAAAAATTTACACATGGAAACATCAAATCAACCAATGTACTAATAACAGAAGAATTTGATAGCTGCATTTCTGATGTTGGATTACCACCTCTGATGAATGCACCAGCAACCATGTCAAGAACCAATGGATATAGAGCTCCAGAAGTAACAGATTCCAAAAAGATCACACAGAAGTCCGACGTATACAGCTTTGGCGTGCTGCTACTCGAATTGCTAACAGGAAAGGTTCCAATGAGATATCCGGGTTATGAGGATGTTGTTGATCTTCCAAGATGGGTTAGATCTGTTGTGAGAGAGGAATGGACAGCTGAAGTATTTGACGAAGAACTTCTTAGAGGACAATATGTCGAAGAGGAAATGGTGCAGATGCTTCAGATTGCACTTGCATGTGTGGCTAAGACACCAGATATGAGGCCTAGAATGGATGAAGCTGTTAGAATGATTGAGGAAATTAAAAATCCTGAGTTTAAGAACAGAACATCCTCTGAATCTGAATATTCTAATGTGCAGACACCATAA 1908 0.4067 MKLQLSNVSLVLLISTLSLFGLIVSAADLNSDRQALLEFASAVPHAPRLNWNESSSICTSWVGVTCNSNHTRVVGIHLPGIGLTGSIPENTIGKLDALRVLSLHSNGLGGNLPSNILSIPSLQFAHLQKNNFSGLIPSSVSPKLVALDISFNSFSGSIPSAFQNLRRLTWFYLQNNSISGPIPDFNLPSLKYLNLSNNKLNGSIPNSIKTFPSSAFVGNSLLCGPPLLNYCSSISPSPSPSPASTQIQKATVAHKKSFGVAAILALVIGGIAFLSLLALVFFLCFLKKKNNKRSGILKGKSSSCAGKAEVSKSFGSGVQAAEKNKLFFFEGSSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGVTMVVKRLKEVMVGKKEFEQQLDIVGRIGRHPNVMPLRAYYYSKDEKLLVYSYMPEGSLFFLLHGNKGAGRTPFDWNSRVKVALGAAKGIAFIHTEGGQKFTHGNIKSTNVLITEEFDSCISDVGLPPLMNAPATMSRTNGYRAPEVTDSKKITQKSDVYSFGVLLLELLTGKVPMRYPGYEDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKTPDMRPRMDEAVRMIEEIKNPEFKNRTSSESEYSNVQTP* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3237 635 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Mtr3g3237 635 Pfam Protein kinase domain 347 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3237 635 SUPERFAMILY Protein kinase-like (PK-like) 347 612 IPR011009 -
Mtr3g3237 635 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515
Mtr3g3237 635 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Mtr3g3237 635 ProSitePatterns Protein kinases ATP-binding region signature. 349 380 IPR017441 GO:0005524
Mtr3g3237 635 PANTHER OS05G0588300 PROTEIN 3 634 - -
Mtr3g3237 635 SUPERFAMILY L domain-like 39 228 - -
Mtr3g3237 635 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Mtr3g3237 635 CDD TM_EGFR-like 262 293 - -
Mtr3g3237 635 Gene3D Ribonuclease Inhibitor 143 233 IPR032675 -
Mtr3g3237 635 Gene3D Transferase(Phosphotransferase) domain 1 419 634 - -
Mtr3g3237 635 Gene3D Phosphorylase Kinase; domain 1 308 418 - -
Mtr3g3237 635 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3237 635 CDD STKc_IRAK 349 614 - -
Mtr3g3237 635 PANTHER RECEPTOR-LIKE KINASE 3 634 - -
Mtr3g3237 635 Gene3D Ribonuclease Inhibitor 30 142 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3237 Mtr-Chr3 46275219 46279512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3237 8 615 Receptor kinase-like Gene Family AT5G58300 59.314 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr3g3237 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3237 - - aprc:113868460 978.393