Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3225 ATGAAGAAGAACGTGGTGAGAGCTTTGCCATTTTTTAAACTATTGAGCTATGCTGATTATGTGGATTGGATTCTTATGGGTTTGGGAACATTAGGTTCGATTGTGCATGGCATGGCACTTCCTGTTGGTTATTTGTTGTTAGGAAAAGCTCTTAATGCTTTTGGAAACAATATTAATAACATTGATGCTATGGTTCCTGCTCTTAAAAAGGTTGTTCCATTTGTGTGGTACATGGCCATAGCCACATTTCCTGCTGGGGTACTTGAAATTGGTTGTTGGATGTATGCAAGTGAAAGACAGTTATCACGCCTAAGATTAGCATATCTGAAAGCAGTCCTCAGTCAAGAGATAGGAGCTTTTGATACAGAATTAACAAGTGGAAAAGTCATCACTGGAATAAGCAAACACATGAGTGTCATACAAGATGCCATTGGCGAGAAGTTAGGTCACTTCACCTCTAGCTGTGCAACTTTCTTTGCCGGAATGGTGATCGCCACAATAGCCTGTTGGGAAGTGGCACTTCTATGCTTAGTGGTTGTCCCTCTTATTCTTTTAATTGGAGCAACTTACACTAAGAAAATGAACAGAATCTCAACTACCAAATTGTTTTACCATTCTGAAGCCACATCTATGATAGAGCAGACAATATCACAAATAAAAACAGTATATGCTTTTGTTGGAGAGGGATTGGCAGTCAAATCCTTCACAGAGAACATGGATAAACAGTATGTCGTAAGCAAAGGGGAAGCACTTGTGAAGGGAGTTGGAACAGGAATGTTTCAAACTGTGAGTTTTTGTTCCTGGTCTCTGATTATATGGGTTGGAGCAGTTGTTGTCAGAGCTGGGAGAGCACAGGGAGGAGATATAATAACTGCAGTTATGAGCATTCTTTTTGGTGCCATATCTATCACTTATGCAGCACCAGACATGCAAATATTCAATCAGGCAAAAGCTGCAGGATATGAGGTCTTCCAAGTGATTCAAAGAAAGCCATTAATACATAATGAATCAAAAGGGAAGATGCCTAATAAGATTGATGGTTCCATTGAGCTTCGAAATGTTTACTTTTCATACCCATCACGGTCAGAGAAACCTATCCTTCAAGGACTGTCATTGTCCATTCCAGCAGGAAAGACAGTAGCTCTAGTTGGCAGCAGTGGCTGTGGAAAGAGCACTGCTATTTCCCTGATAACTAGGTTTTATGACCCGACTAGAGGAGAAATTTTTATTGACAGTCACAATATCAAGGATCTTGATCTGAAGTTCCTTCGAAGTAATATAGGGGCTGTTTACCAAGAACCATCACTCTTCACAGGCACGATCAAGGACAACTTGAAACTGGGAAAGATGGACGCCAGTGATGAAGAGATTCAAAAGGCAGCAGTGATGTCCAATGCACACTCTTTCATATCACAGCTTCCTAATCAGTACCTAACTGAGGTAGGACAAAGGGGCGTCCAAGTATCAGGAGGTCAGAAACAGAGAATTGCGATCGCAAGAGCCATACTGAAAAATCCTCCCATTCTTTTGCTTGATGAGGCCACTAGTGCCCTTGATTCAGAGTCAGAAAAGCTGGTTCAAGAAGCACTTGATACAGCTATGCAGGGAAGGACTGTCATCTTGATTGCACACAGGCTCTCAACAGTAGTAAATGCAGATATGATTGCCGTAGTGGAGAATGGACAAATTGTAGAGACAGGAACACACCAGAGTTTGTTAGACACAAGTAAATTCTATAGTACATTATTCAGCATGCAGAACCTTGAACCAGCTCCTGAGCTAAGAACTACAACTTCCAAAGATAAAAGTGCCCGCCGAGAAGACACTATTGATGAAACTAGACCAGTACCAGAGACACAAAGAGAGGTCCAAAGAGATCTCATAGAGCATTCTGTACTAAAGGAACAGAACAAGACTGGCACAAGAGAAGAAAATATATTTTTCAGAATTTGGTATGATTTAAAAAAGAAAGAGCTTGTGAAGATTGCTATTGGATCCTTTGCTGCAGCTTTCTCTGGCATCTCAAAGCCGTTTTTTGGATTCTACATCATCACCATTGGAGTAGCATACTTCCAAGACGATGCAAAACGAAAAGTTGGACTATTCTCAGCCATCTTCTCAGCAATAGGACTACTTTCATTATTTAGCCACACCTTCCAGCATTACTTCTTTGGAGTGGTTGGAGAAAAGGCCATGGCAAATTTCAGACGCGCTCTATATTCAGGTGTGCTTTGTAACGAAGTAGGCTGGTTTGACAAACCTGAGAACACTGTTGGTTCATTAACATCACGCATTATCAGTGATACTTCCATGGTCAAGATCATAATTGCTGATCGCATGTCCGTGATTGTGCAATGTGTTTCCTCCATACTTATAGCAACCGGTGTTAGCATGTATGTCAATTGGAGAATGGCTTTGGTAGCATGGGCTGTAATGCCCTGCCACTTTATAGGTGGCCTCATTCAAGCCAAATCTGCCAAAGGATTTTCAGGTGACTACTCTGCTACACATTCAGACCTTGTTGCTCTTGCGTCCGAGTCCACAACCAACATAAGGACTATTGCATCATTTTGTCATGAAGAGCAAGTGCTGGAGAAAGCCAAAACATATCTGGACATTCCAAAGAAAAAGTACAGGAAAGAAAGTATCAAATATGGCATCATTCAAGGCTTCTCCCTTTGCTTGTGGAACATTGCACACGCTGTTGCTTTGTGGTACACTACAATTCTAGTTGACAGACGACAAGCCTCCTTTGAAAATGGAATAAGAGCCTACCAAATTTTTTCTCTCACAGTTCCTTCTATCACAGAATTATACACATTGATCCCGACAGTCATCACTGCCATCAATATGCTAACCCCGGCATTCAAAACCCTTGACCGTAAAACTGAAATTGAGCCAGATATACCGGATGATTCCCAGCCTGACAGGATCCAAGGAAACGTCGAATTTGAAAATGTAAATTTCAAATACCCTTTAAGACCTACAGTAACTGTTCTAGACAATTTCAGTTTGCAAATTGAAGCTGGATCTAAGGTGGCTTTTGTAGGACCAAGTGGCGCTGGAAAATCATCTGTTTTGGCCCTTTTACTAAGATTTTATGATCCGGTGGTGGGAAAAGTATTAATTGATGGGAAAGACTTGAGGGAATACAATCTAAGATGGTTAAGGACACAGATTGGGCTGGTACAACAAGAACCGCTGCTTTTTAACTGCTCAATTAGAGAAAATATTTGCTATGGAAATAATGGAGCTTTTGAAAGTGAAATTGTGGAGGTTGCAAGAGAAGCCAATATACATGAATTTGTCAGTAATCTACCAAATGGATATAACACTGTTGTTGGCGAGAAAGGCTGCCAGCTTTCGGGAGGACAGAAGCAAAGAATAGCCATTGCCAGAACCTTACTAAAGAAGCCAGCAATATTACTCCTTGATGAAGCAACAAGTGCTCTCGATGCTGAGTCCGAAAGAACTATAGTAAATGCTATTAAAGCAATGAATCTGAAGGAAGAAACTGGTTTGCGTTCAAGAATCACCCAGATAACAGTAGCTCATAGACTTTCCACAGTCAGAAATTCAGATACCATAATAGTCATGGAAAAAGGTAAAATTGTAGAAACAGGCTCCCATTCAACCCTAATTGAAGTGGATGCAGGACTCTATTCAAGATTATTCAGACTACAGAGCTTTGATGAAACCTCATAA 3705 0.4089 MKKNVVRALPFFKLLSYADYVDWILMGLGTLGSIVHGMALPVGYLLLGKALNAFGNNINNIDAMVPALKKVVPFVWYMAIATFPAGVLEIGCWMYASERQLSRLRLAYLKAVLSQEIGAFDTELTSGKVITGISKHMSVIQDAIGEKLGHFTSSCATFFAGMVIATIACWEVALLCLVVVPLILLIGATYTKKMNRISTTKLFYHSEATSMIEQTISQIKTVYAFVGEGLAVKSFTENMDKQYVVSKGEALVKGVGTGMFQTVSFCSWSLIIWVGAVVVRAGRAQGGDIITAVMSILFGAISITYAAPDMQIFNQAKAAGYEVFQVIQRKPLIHNESKGKMPNKIDGSIELRNVYFSYPSRSEKPILQGLSLSIPAGKTVALVGSSGCGKSTAISLITRFYDPTRGEIFIDSHNIKDLDLKFLRSNIGAVYQEPSLFTGTIKDNLKLGKMDASDEEIQKAAVMSNAHSFISQLPNQYLTEVGQRGVQVSGGQKQRIAIARAILKNPPILLLDEATSALDSESEKLVQEALDTAMQGRTVILIAHRLSTVVNADMIAVVENGQIVETGTHQSLLDTSKFYSTLFSMQNLEPAPELRTTTSKDKSARREDTIDETRPVPETQREVQRDLIEHSVLKEQNKTGTREENIFFRIWYDLKKKELVKIAIGSFAAAFSGISKPFFGFYIITIGVAYFQDDAKRKVGLFSAIFSAIGLLSLFSHTFQHYFFGVVGEKAMANFRRALYSGVLCNEVGWFDKPENTVGSLTSRIISDTSMVKIIIADRMSVIVQCVSSILIATGVSMYVNWRMALVAWAVMPCHFIGGLIQAKSAKGFSGDYSATHSDLVALASESTTNIRTIASFCHEEQVLEKAKTYLDIPKKKYRKESIKYGIIQGFSLCLWNIAHAVALWYTTILVDRRQASFENGIRAYQIFSLTVPSITELYTLIPTVITAINMLTPAFKTLDRKTEIEPDIPDDSQPDRIQGNVEFENVNFKYPLRPTVTVLDNFSLQIEAGSKVAFVGPSGAGKSSVLALLLRFYDPVVGKVLIDGKDLREYNLRWLRTQIGLVQQEPLLFNCSIRENICYGNNGAFESEIVEVAREANIHEFVSNLPNGYNTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTIVNAIKAMNLKEETGLRSRITQITVAHRLSTVRNSDTIIVMEKGKIVETGSHSTLIEVDAGLYSRLFRLQSFDETS* 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3225 1234 PANTHER ABC TRANSPORTER B FAMILY 4 1230 - -
Mtr3g3225 1234 CDD ABC_6TM_Pgp_ABCB1_D2_like 656 965 - -
Mtr3g3225 1234 MobiDBLite consensus disorder prediction 595 621 - -
Mtr3g3225 1234 CDD ABC_6TM_Pgp_ABCB1_D1_like 26 323 - -
Mtr3g3225 1234 SUPERFAMILY ABC transporter transmembrane region 656 968 IPR036640 GO:0005524|GO:0016021
Mtr3g3225 1234 Gene3D ABC transporter type 1, transmembrane domain 13 943 IPR036640 GO:0005524|GO:0016021
Mtr3g3225 1234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 975 1228 IPR027417 -
Mtr3g3225 1234 ProSitePatterns ABC transporters family signature. 488 502 IPR017871 GO:0005524
Mtr3g3225 1234 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 982 1226 IPR003439 GO:0005524
Mtr3g3225 1234 Pfam ABC transporter transmembrane region 664 921 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g3225 1234 Pfam ABC transporter transmembrane region 27 300 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g3225 1234 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 28 315 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g3225 1234 Gene3D - 339 587 IPR027417 -
Mtr3g3225 1234 CDD ABC_MTABC3_MDL1_MDL2 349 586 - -
Mtr3g3225 1234 PANTHER BRACHYTIC2 4 1230 - -
Mtr3g3225 1234 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 663 947 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g3225 1234 Pfam ABC transporter 1000 1149 IPR003439 GO:0005524
Mtr3g3225 1234 Pfam ABC transporter 367 516 IPR003439 GO:0005524
Mtr3g3225 1234 CDD ABC_MTABC3_MDL1_MDL2 982 1228 - -
Mtr3g3225 1234 MobiDBLite consensus disorder prediction 590 621 - -
Mtr3g3225 1234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 340 586 IPR027417 -
Mtr3g3225 1234 SUPERFAMILY ABC transporter transmembrane region 13 331 IPR036640 GO:0005524|GO:0016021
Mtr3g3225 1234 SMART AAA_5 376 568 IPR003593 -
Mtr3g3225 1234 SMART AAA_5 1009 1203 IPR003593 -
Mtr3g3225 1234 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 349 585 IPR003439 GO:0005524
Mtr3g3225 1234 ProSitePatterns ABC transporters family signature. 1121 1135 IPR017871 GO:0005524
Mtr3g3225 1234 Gene3D - 972 1233 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3225 Mtr-Chr3 46149836 46156930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3225 2 1233 Calmodulin-binding Proteins AT2G36910 41.013 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3225 K05658 - zju:107414909 1796.17