Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3205 ATGGGCTCTCTTGATTGTGTTCCATCGGTCGATGATGGGATGGCGGTGTTGTCTTTGAATTCTCTTCCGTTAGGGTTTCGATTCCGACCTACCGACGAGGAACTTATCGATTACTACTTACGTTCGAAGATCAATGGGAATGGTGACGAGGTTTGGGTTATCCGAGAGATTGATGTCTGTAAATGGGAACCATGGGACATGCCTGATTTGTCTGTGGTACGAAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCTCAGGATCGTAAGTATCCAAATGGACATCGATTGAACAGAGCAACAAATCATGGATATTGGAAGGCAACAGGGAAGGATCGTAAAATCAAATCTGGAACCATCTTGATTGGAATGAAGAAGACTTTAGTTTTCTATAGTGGTCGTGCACCTAAAGGAAAGAGGACTAACTGGGTTATGCACGAGTATCGTCCCACCCTCAAGGAGCTTGATGGCACCAACCCGGGACAGAATCCCTATGTCCTCTGTCGATTATTTAAGAAAAACGATGAGAGCGTTGAAGTTTCAAACTATGGTGAAGTGGAGCAAACTACTTCAGCTCCTTTGGCTGCTAATTACTCTCCAGAAGAAATACAATCTGATCCGGCTCCTATTACAGTATCCACATCACAGGTCACGGAAGAGGATAAGCAGCTGGCTGTTATCCCTGATATCTCTGAGGAAACCATATCTAATGTTATAACCTCGGTTGATTACCATAGCGATGGATATGATGCTCATGATGTCCAAAATCAAATTGCAAAACTAGCTGCAGAGGATGATCAGGCGTTGAACTTTGACATGTATTATAACCCGAAAGACGGTCTATTGTTAGATGACAGATTATTCTCCCCACCTCTGGTGCATATGCCACAAGAATTTCATTATCAAGCAAACAATGAATCAGACGGTCGATGTGGACTTCAGTATGGTACAAATGAGATAAATATTTCAGACTTTTTGAATTATGATCTTAACTGGGATCAAATTCCCTGTGAGGTGTCCGTTAGTCACCAGCCGAACTTCCCCATGTTAAATGTTAAGGACAGTGGTTCAGGAAGCAACTCGGATGTGGAAGTAGCCAATATGACTGGTATGCAAGCTGCTTATCCTCACGAGGCAATTGACAGAAGGATTCCTTTTGCGACAACACCGTCGTTTAGCCACACCTTTGATTACAGTGGTGATGATCAAAAGAGCAATGTTGTTTTATTACAAAACAATTTCCAGACGGCTTTCCCGTCGGATGTTAATAATACTGGTGAAGTGTACAATGCCGTCAATGGATATGAGCAACCAAGGACCTGTAATACAATTATGAGCAGTGAAAGTGGAATCGTAAGGAGGGCCCGGCCAACACGAGACGAACAATTTAAGACAAATCCGATGCAAGGTACTGCTCAAAGGAGAATTCGGTTGTCAAAGATTGAACATGTCTCATGTGGGATGGTTAAGGTTAAAGATGAGAGTTGTACACAAGAACAACATAATTCAAAACCGATTATTGCTGTGGAGAAAGCTGCGGAAAATCATGCTTCGGATGATGAAAGTGCTATTTGTACTAATCATGCATGTAAACAGAGGAAGGTTCCCAAGTCAATTGCAAATGCAAGCAAGGGGTTAAGAAATTTTTTATTGCTAGGAAGAGCACCTTTCAGATCAAAGACTTCCTCCAATTGTGCTCTGTGGTCTTCTGTTTTTGTAGTTTCTGCATCTGTGCTGGTTTCATTAGCAGCCTTTACTAACATATGGGGATATCTTAAATTTTGA 1782 0.4214 MGSLDCVPSVDDGMAVLSLNSLPLGFRFRPTDEELIDYYLRSKINGNGDEVWVIREIDVCKWEPWDMPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGTILIGMKKTLVFYSGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNPYVLCRLFKKNDESVEVSNYGEVEQTTSAPLAANYSPEEIQSDPAPITVSTSQVTEEDKQLAVIPDISEETISNVITSVDYHSDGYDAHDVQNQIAKLAAEDDQALNFDMYYNPKDGLLLDDRLFSPPLVHMPQEFHYQANNESDGRCGLQYGTNEINISDFLNYDLNWDQIPCEVSVSHQPNFPMLNVKDSGSGSNSDVEVANMTGMQAAYPHEAIDRRIPFATTPSFSHTFDYSGDDQKSNVVLLQNNFQTAFPSDVNNTGEVYNAVNGYEQPRTCNTIMSSESGIVRRARPTRDEQFKTNPMQGTAQRRIRLSKIEHVSCGMVKVKDESCTQEQHNSKPIIAVEKAAENHASDDESAICTNHACKQRKVPKSIANASKGLRNFLLLGRAPFRSKTSSNCALWSSVFVVSASVLVSLAAFTNIWGYLKF* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3205 593 Gene3D NAC domain 31 177 IPR036093 GO:0003677|GO:0006355
Mtr3g3205 593 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 15 459 - -
Mtr3g3205 593 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Mtr3g3205 593 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 15 459 - -
Mtr3g3205 593 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Mtr3g3205 593 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3205 Mtr-Chr3 46003171 46006974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3205 14 477 NAC Transcription Factor Family AT4G35580 40.977 1.78e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr3g3205 NAM 3.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3205 - - gmx:100777071 730.709