Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3204 ATGCATGCTTGTGGAGATGATGCTCATGCTACTATGCTACTTGGGGCTGCAAAGTTGCTCAATCGGCGCAAAAATAAGCTTAAGATGGTGACGTTGTCTCTGATTTCGCTTCCGCTAGGGTTCCGATTCCGACCTACAGACGAGGAACTTATCGATTACTACCTTCGTTTAAAGATTAACGGCAATGGTGACGAGGTTCAGGTTATCCGAGAAATCGATGTCTGCAAATGGGAACCCTGGGATATGCCCGATTTGTCAGTGATAAAAGACAATGACCCAGAGTGGTTCTTCTTCTGTCCACAGGATCGACAATATCCAAATGGGAATCGATTGAACAGAGAAACAAATCATGGATATTGGAAGGCAACAGGGAAGGATCGTAAAATCAAATCTGGAACCATCTTGATTGGGATGAAGAAGACATTAGTTTTCTACATTAGTCGTGCACCTAACGGGAGGAGGTCTAATTGGGTAATGCACGAGTATCGTCCCACCCTTGAGGAGCTTGATGGAACGAACCCAGGACAGAAAGCATATGTGCTATGTCGATTATTTAAGAAAAACGATGAGAGCCTTGAAGTTTCAAACTGTGGTGAGGGGGAGCAAACTAATTCAGCTCCAGAAGAACTACAATCTGATCCAGCCCCCATTACAGTATCCACATCACAGGTCAGACAAGAGGATAAGCAGCAGGCCGTTATCCCTGGTATCTCAGAGGAAAAGTGA 726 0.449 MHACGDDAHATMLLGAAKLLNRRKNKLKMVTLSLISLPLGFRFRPTDEELIDYYLRLKINGNGDEVQVIREIDVCKWEPWDMPDLSVIKDNDPEWFFFCPQDRQYPNGNRLNRETNHGYWKATGKDRKIKSGTILIGMKKTLVFYISRAPNGRRSNWVMHEYRPTLEELDGTNPGQKAYVLCRLFKKNDESLEVSNCGEGEQTNSAPEELQSDPAPITVSTSQVRQEDKQQAVIPGISEEK* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3204 241 Gene3D Zn peptidases 1 29 - -
Mtr3g3204 241 ProSiteProfiles NAC domain profile. 37 187 IPR003441 GO:0003677|GO:0006355
Mtr3g3204 241 Gene3D NAC domain 48 192 IPR036093 GO:0003677|GO:0006355
Mtr3g3204 241 Pfam No apical meristem (NAM) protein 38 163 IPR003441 GO:0003677|GO:0006355
Mtr3g3204 241 SUPERFAMILY NAC domain 29 187 IPR036093 GO:0003677|GO:0006355
Mtr3g3204 241 MobiDBLite consensus disorder prediction 195 229 - -
Mtr3g3204 241 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 31 240 - -
Mtr3g3204 241 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 31 240 - -
Mtr3g3204 241 MobiDBLite consensus disorder prediction 195 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3204 Mtr-Chr3 45996618 46000765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3204 29 213 NAC Transcription Factor Family AT4G35580 65.957 2.22e-88 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr3g3204 NAM 7.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3204 - - mtr:MTR_3g093040 446.432