Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3184 ATGGCGCTAGCAGCACTTGCTTCTTGTTCTTTTTCTATAACAACGTTTCATCCCTACTACCCATCAAATCCTTCACACTCCCGTTCACCCTCAACATTTTCCCCTCATCTTCAAACTCAATCCTCCTTTTCCTTCCTCGCCAAATCACCACCACCAAACAACCACTTTTTCCGTTTTCATTTTCGACCCTCCATCCTTTGCCGCTGTAGTAGTTACTCCCCCAATGTCAATACGTATATCGGTACACTTGTCTCTTTATTTGAAGAAATCGGTATTAGTTTCAAGCAAACAGAATTGCTCTTACTCAATGCCCCTGAACTTAACTCTATTCCATTGGATTCATTGCGTGATCGCGTTTTTTCATTATATTCTCTCGGGTTAGATCGTGTTTCCATCAATCACTTAGTTACTGAACGTTTAACTGTCCTAACTGCTAATGAAATTGACCCATTGTTGAGTTTTTTGAGAAATGAATTACAAGGACAACTTGAGAAATCGAAGCTGAAGCGGCTTTTATTAGCTAATGAAACGAAAAATTTATCTGGGTTTCCTCAGAAGGTTCGATTGCTTGTTGATAGTGGAATTCCTGTTGATAAGATTGTACATGTGCTCAACAAAGTGAATTTGTCGAAGGCGATTTGTCATAGGTCAATAGATGAAATTGAAAGAATTATAGATTTCTTAAAACCCTTTGGTGGTATTCATTTGATTGTGAAGCATCCTGTAATTCTCAATTGTGATTTGCATAATCAGCTTATTCCTAGAATTAGAGTTCTTACTGCGTTAAGTGGTGGAGATGAGGATAGTATTGGGAAAGTGCTGAATAGGTTTCCTATTATCTTGAATTATAGTGTGGAACATCTTGAGGAACATATAAAGTTTCTGAGGTGTTTTGCAGACCTTGATGATCAACAAATATTTAAGATAGTGTTGGTGTTTCCGGCTATCTTTACCAGTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGAATGTGGGTTAGACGCTGACGAAATCTTCAAGTTATTGACCAAAGCAGCGTTGTTTTTGAGCATTTCGTTCCGTTCGAACCTTGCGTATAAGCTTGGGGTTTTGGTCAAGATTGGGTATAAATATAGGACGAAGGAGTTAGCAGTGGCGATTGCAGCTTCTACTAGAATAAGCTGTGAGAATATGCAGAAGATGGTTAGCCTATTCTTGAATTATGGGTTTTCATTAGAAGACATTTTTGCTATGAGCAAGAAGCATCCTCAGATACTGCAGTATCATCATGCCTCTCTAGAGAAGAAGATGGATTACATGATAGAGGAGATGAATCGTGACATTCAAGAGTTGCTGGATTTTCCTGCATATCTTGGATACAAGCTTGATGACAGAATTAAGCATAGGTATGAAATAAAGAAGGATTTAAGGGGGGAACAAATGTCTATCAATAAGCTTTTAACTGTTTCAAGTGAGAACTTCACTGGCAAACGAAAAAAGGTTTCTTCTGTAAAATCTGAATTGAAATAA 1521 0.3807 MALAALASCSFSITTFHPYYPSNPSHSRSPSTFSPHLQTQSSFSFLAKSPPPNNHFFRFHFRPSILCRCSSYSPNVNTYIGTLVSLFEEIGISFKQTELLLLNAPELNSIPLDSLRDRVFSLYSLGLDRVSINHLVTERLTVLTANEIDPLLSFLRNELQGQLEKSKLKRLLLANETKNLSGFPQKVRLLVDSGIPVDKIVHVLNKVNLSKAICHRSIDEIERIIDFLKPFGGIHLIVKHPVILNCDLHNQLIPRIRVLTALSGGDEDSIGKVLNRFPIILNYSVEHLEEHIKFLRCFADLDDQQIFKIVLVFPAIFTSSRERKLRPRIQFLKECGLDADEIFKLLTKAALFLSISFRSNLAYKLGVLVKIGYKYRTKELAVAIAASTRISCENMQKMVSLFLNYGFSLEDIFAMSKKHPQILQYHHASLEKKMDYMIEEMNRDIQELLDFPAYLGYKLDDRIKHRYEIKKDLRGEQMSINKLLTVSSENFTGKRKKVSSVKSELK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3184 506 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 87 499 - -
Mtr3g3184 506 PANTHER CGI-12 PROTEIN-RELATED 87 499 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 SMART mt_12 98 128 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 SMART mt_12 343 374 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 SMART mt_12 445 476 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 SMART mt_12 307 338 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 Pfam mTERF 389 491 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 Pfam mTERF 190 372 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 Pfam mTERF 84 295 IPR003690 GO:0003690|GO:0006355
Mtr3g3184 506 Gene3D Transcription termination factor 3, mitochondrial 265 502 IPR038538 -
Mtr3g3184 506 Gene3D Transcription termination factor 3, mitochondrial 71 264 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3184 Mtr-Chr3 45820913 45822741 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr3g3184 mTERF 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3184 - - gmx:100799904 585.874