Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3181 ATGAGTTCCGGCGAATTGGGCTGCATTTACGCCACCTTGATCCTCCACGACGATGGAATCCCAATCACCGCGGAGAAGATCGGCACTTTGTTGAAGGCTGCTAACGTCACCGTTGAATCTTACTGGCCAAGCCTATTCGCTAAGCTTGCTCAGAGCAAGAACGTTGATGATCTCGTTTTGAACTCCGGCGCTGTTGGTGGTGCCGCCGTTGCCGTATCTGCACCTGCTGCTGGTGGTGGAACCGCAGCAGCAGCCGAACCTGCCGCCGTGGAAAAGAAGGAGGAAGCCAAGGAAGAAAGTGACGATGACATGGGCTTTAGTTTGTTTGACTAG 333 0.5375 MSSGELGCIYATLILHDDGIPITAEKIGTLLKAANVTVESYWPSLFAKLAQSKNVDDLVLNSGAVGGAAVAVSAPAAGGGTAAAAEPAAVEKKEEAKEESDDDMGFSLFD* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3181 110 MobiDBLite consensus disorder prediction 88 104 - -
Mtr3g3181 110 Gene3D - 1 63 IPR038716 -
Mtr3g3181 110 Hamap 50S ribosomal protein L12 [rpl12]. 6 110 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mtr3g3181 110 Pfam 60s Acidic ribosomal protein 22 109 - -
Mtr3g3181 110 MobiDBLite consensus disorder prediction 79 110 - -
Mtr3g3181 110 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 110 - -
Mtr3g3181 110 CDD Ribosomal_P1 5 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3181 Mtr-Chr3 45780504 45782215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3181 1 110 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 58.407 4.11e-37 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3181 K02942 - rcu:8269526 130.568