Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3171 ATGACCAGTTCTTTTCCTACTACTACTAAAACCAAAGTCCAAAGGCACCATTTAGCAGACATCAAATATCAAACAAGGATTTCAGTCCTACTACTACCAACCACATTGAGCTATACTACTATCAATATGATCCAAATACGACTTATTTTGCTCCTATGTTTCCTACTTTCTCATTTCCATGTCATCATTTGCAACAATAACACAGACAAAGATATTCTTCTATCATTCAAATTACAAGTAACTGATCCAAACAATGCCTTGTCCAGTTGGAAACAAGATTCTAATCATTGTACCTGGTATGGTGTCAACTGTTCCAAAGTTGATGAAAGAGTTCAATCTCTAACCTTACGGGGACTTGGCCTCTCTGGTAAACTACCCTCTAACCTCTCCAACCTCACTTACCTTCATTCACTTGACCTTTCCAATAACACTTTTCATGGCCAAATTCCATTCCAATTTTCTCATCTCTCACTCCTCAATGTCATTCAATTAGCTATGAACGATCTCAATGGCACACTTCCACCACAATTGGGTCAACTCCATAATCTACAAAGTTTAGACTTTTCTGTCAATAATCTCACTGGTAAAATTCCTTCAACCTTTGGCAATCTCTTATCTCTCAAGAATCTTTCCATGGCAAGGAACATGCTTGAGGGTGAAATTCCAAGTGAATTGGGCAATCTCCACAATCTTTCAAGACTTCAACTCTCAGAGAATAACTTCACCGGCAAGCTTCCTACTTCTATCTTCAACTTATCTTCCTTAGTTTTCTTATCCCTCACACAGAACAATCTATCAGGCGAGTTGCCACAAAATTTCGGCGAAGCTTTTCCGAATATAGGGACACTTGCTTTGGCAACCAATAGATTTGAAGGGGTAATTCCTAGTTCCATATCCAATTCATCACATCTTCAAATTATTGATCTTTCTAACAATAGGTTTCATGGGCCAATGCCTCTTTTCAACAACTTGAAAAACCTCACTCATTTGACTCTTGGTAAAAACTATCTCACTTCCAACACATCATTGAATTTTCAGTTCTTTGAATCCCTTCGAAACTCAACTCAGTTGCAGATTCTTATGATCAATGATAACAACTTGACCGGGGAACTTCCAAGTTCGGTTGATTATCTTTCAAGCAATCTACAACAGTTTTGTGTTGCTAATAATCAGCTAAATGGAAGCATTCCTCATGGAATGAAGAAGTTTCAAAATCTCATATCCTTCTCTTTTGAACAGAATTATTTCACAGGAGAGTTACCATTAGAATTAGGAACACTCAAGAAATTGGAGAGGCTATTGATATACCAAAATAGATTGTCTGGTGAAATTCCAGATATATTTGGAAATTTTACAAATCTGTTTATTCTAGCAATAGGAAACAACCAGTTCTCAGGTAGAATTCATGCAAGTATCGGACGATGCAAGAGATTGAGTTTTCTGGACTTGCGAATGAATAAGCTTGCTGGTGTCATACCCATGGAGATTTTTCAACTCTCTGGCTTGACAACTTTATACTTACATGGAAATTCTCTGAACGGTTCGCTTCCTCCTCAATTCAAAATGGAGCAGCTAGAGGCCATGGTTGTTTCGGACAACAAGCTGTCAGGGAACATTCCTAAAATCGAAGTTAACGGATTGAAAACACTTATGATGGCAAGAAACAATTTTAGTGGCTCAATTCCAAATAGTCTAGGGGATTTGCCATCCCTTGTGACTTTAGATCTATCATCAAACAGTCTCACTGGTCCAATCCCTGAGAGTTTAGAAAAGCTCAAGTATATGGTGAAATTAAATTTGTCCTTCAACAAATTGGAAGGGGAAGTTCCTATGGAAGGTATTTTTATGAACCTAAGCCAGGTTGATCTCCAAGGTAACAACAAACTATGTGGCCTTAACAATCAAGTTATGCACAAGTTAGGAGTCACTTTGTGTGTTGCAGGTAAGAAAAACAAGAGAAACATTTTACTACCTATCATACTAGCGATTATAGGTGCGGCTGTTTTGTTTGCTTCAATGATCTATCTATTTTGGCTGCTAATGTCCTTAAAGAAGAAACACAAGGCAGAGAAAACAAGTTTGTCATCAACTACTATAAAAGGGTTGCATCAAAATATATCCTATGGTGATATTAGGCTTGCTACGAACAATTTTTCAGCTGCAAATATGGTTGGAAAAGGAGGCTTTGGATCTGTTTACAAGGGTGTGTTCAACATCAGCAGTTATGAAAATCAAACCACCACACTTGCTGTTAAAGTTCTTGACCTGCAACAAAGCAAAGCCTCTCAGAGTTTTAGTGCAGAATGTGAAGCTTTGAAAAATGTTAGGCATCGGAATCTGGTAAAGGTGATCACTTCTTGCTCCAGCACTGACTACAAGGGGGATGATTTTAAGGCCCTTGTTTTGCAATTCATGCCTAATGGTAATTTGGAGATGAGTTTATACCCGGAAGATTTTGAGTCAGGATCTTCTCTAACCTTGTTGCAAAGGTTAAACATTGCCATTGATGTTGCATCTGCCATGGACTACTTGCACCATGACTGTGACCCACCAATAGTCCATTGTGATCTGAAACCTGTCAATGTTCTACTAGATGAAGATATGGTTGCACATGTAGCAGATTTTGGATTGGCAAGGTTTCTCTCTCAAAATCCATCAGAGAAACATAACAGCACCCTAGAACTGAAGGGATCAATCGGCTATATCGCCCCAGAATATGGTTTAGGAGGCAAGGCTTCAACTAGTGGTGATGTGTACAGTTTTGGGATCTTACTACTAGAGATGTTGATAGCTGAAAAACCAACAAACGAAATGTTCAAAGAAGAAGTAAGCATGAACAGATTTGTATCAGACATGGATGACAAGCAATTACTAAAGGTTGTTGATCAAAGGCTTATTAACCAATACGAATATTCGACACAAATTTCAAGCAGTGATAGTCATAGTGGTGAGTCTGGCAGCATCAGCTATAGTGATGGTAGTAACGCACATTGGATGCACAAAGCTGAGGAGTGCATAGCTACTACTATGAGAGTTGGCTTGTCATGTATAGCCCATCATCCCAAAGATCGGTGTACCATGAGAGAAGCCTTATCAAAATTGCATGGAATTAAGCAGTCTATACTAGGCTTGTGA 3135 0.386 MTSSFPTTTKTKVQRHHLADIKYQTRISVLLLPTTLSYTTINMIQIRLILLLCFLLSHFHVIICNNNTDKDILLSFKLQVTDPNNALSSWKQDSNHCTWYGVNCSKVDERVQSLTLRGLGLSGKLPSNLSNLTYLHSLDLSNNTFHGQIPFQFSHLSLLNVIQLAMNDLNGTLPPQLGQLHNLQSLDFSVNNLTGKIPSTFGNLLSLKNLSMARNMLEGEIPSELGNLHNLSRLQLSENNFTGKLPTSIFNLSSLVFLSLTQNNLSGELPQNFGEAFPNIGTLALATNRFEGVIPSSISNSSHLQIIDLSNNRFHGPMPLFNNLKNLTHLTLGKNYLTSNTSLNFQFFESLRNSTQLQILMINDNNLTGELPSSVDYLSSNLQQFCVANNQLNGSIPHGMKKFQNLISFSFEQNYFTGELPLELGTLKKLERLLIYQNRLSGEIPDIFGNFTNLFILAIGNNQFSGRIHASIGRCKRLSFLDLRMNKLAGVIPMEIFQLSGLTTLYLHGNSLNGSLPPQFKMEQLEAMVVSDNKLSGNIPKIEVNGLKTLMMARNNFSGSIPNSLGDLPSLVTLDLSSNSLTGPIPESLEKLKYMVKLNLSFNKLEGEVPMEGIFMNLSQVDLQGNNKLCGLNNQVMHKLGVTLCVAGKKNKRNILLPIILAIIGAAVLFASMIYLFWLLMSLKKKHKAEKTSLSSTTIKGLHQNISYGDIRLATNNFSAANMVGKGGFGSVYKGVFNISSYENQTTTLAVKVLDLQQSKASQSFSAECEALKNVRHRNLVKVITSCSSTDYKGDDFKALVLQFMPNGNLEMSLYPEDFESGSSLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDLKPVNVLLDEDMVAHVADFGLARFLSQNPSEKHNSTLELKGSIGYIAPEYGLGGKASTSGDVYSFGILLLEMLIAEKPTNEMFKEEVSMNRFVSDMDDKQLLKVVDQRLINQYEYSTQISSSDSHSGESGSISYSDGSNAHWMHKAEECIATTMRVGLSCIAHHPKDRCTMREALSKLHGIKQSILGL* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3171 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 852 864 IPR008271 GO:0004672|GO:0006468
Mtr3g3171 1044 Pfam Leucine rich repeat N-terminal domain 66 105 IPR013210 -
Mtr3g3171 1044 Pfam Leucine rich repeat 546 605 IPR001611 GO:0005515
Mtr3g3171 1044 Gene3D Ribonuclease Inhibitor 443 543 IPR032675 -
Mtr3g3171 1044 SUPERFAMILY Protein kinase-like (PK-like) 695 1034 IPR011009 -
Mtr3g3171 1044 Gene3D Phosphorylase Kinase; domain 1 698 804 - -
Mtr3g3171 1044 ProSitePatterns Protein kinases ATP-binding region signature. 724 752 IPR017441 GO:0005524
Mtr3g3171 1044 Pfam Leucine Rich Repeat 182 204 IPR001611 GO:0005515
Mtr3g3171 1044 Gene3D Ribonuclease Inhibitor 221 339 IPR032675 -
Mtr3g3171 1044 Gene3D Ribonuclease Inhibitor 65 220 IPR032675 -
Mtr3g3171 1044 Gene3D Ribonuclease Inhibitor 340 442 IPR032675 -
Mtr3g3171 1044 Gene3D Transferase(Phosphotransferase) domain 1 805 1041 - -
Mtr3g3171 1044 SMART serkin_6 718 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3171 1044 SMART LRR_typ_2 324 350 IPR003591 -
Mtr3g3171 1044 SMART LRR_typ_2 427 450 IPR003591 -
Mtr3g3171 1044 SMART LRR_typ_2 228 252 IPR003591 -
Mtr3g3171 1044 SMART LRR_typ_2 180 203 IPR003591 -
Mtr3g3171 1044 SMART LRR_typ_2 568 592 IPR003591 -
Mtr3g3171 1044 SMART LRR_typ_2 499 522 IPR003591 -
Mtr3g3171 1044 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 43 131 - -
Mtr3g3171 1044 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 203 1035 - -
Mtr3g3171 1044 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 123 203 - -
Mtr3g3171 1044 SUPERFAMILY L domain-like 93 290 - -
Mtr3g3171 1044 ProSiteProfiles Protein kinase domain profile. 718 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3171 1044 PANTHER RECEPTOR-LIKE PROTEIN 55 203 1035 - -
Mtr3g3171 1044 PANTHER RECEPTOR-LIKE PROTEIN 55 123 203 - -
Mtr3g3171 1044 PANTHER RECEPTOR-LIKE PROTEIN 55 43 131 - -
Mtr3g3171 1044 Pfam Protein tyrosine and serine/threonine kinase 721 944 IPR001245 GO:0004672|GO:0006468
Mtr3g3171 1044 SUPERFAMILY RNI-like 234 613 - -
Mtr3g3171 1044 Gene3D Ribonuclease Inhibitor 544 655 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3171 Mtr-Chr3 45669637 45673348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3171 66 1039 Receptor kinase-like Gene Family AT3G47570 39.980 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr3g3171 PK_Tyr_Ser-Thr 6.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3171 - - mtr:MTR_3g092390 2016.89