Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3165 ATGGGTCATTGCTGCAGCAAAAGCATCGCAGTCGACAACGAAACCGTCGCCACCGATCACCACCACAAACCACCACCGCACCACACACCATCACCGCTTTCGGTTTCTCAACCTGTTTCCGGCGTCAGTGATGCTACTCCGGGAAGACAAACTCCGGCAACCTCTTTCTCCACAAGTCCTTTCAATAGTCCTCTTCCGGCAGGTGTGATGCCGTCGCCGGCGACGAAGACTCCGGGGAGGAAATTCAGGTGGCCACTTCCTCCACCGTCACCAGCGAAGCCTATAATGGACCTTTACCGGAAGATGAAACCGAAAGATGGACCTATACCGGAGGAGCATGGAGAAGGTGGTGGTGGTGGAGAGAGAACGTTGGATAAGAGTTTTGGGTATGGGAAGAATTTTGGGGCGAAATTTGAGCTTGGGAAGGAAGTTGGTCGAGGGCATTTTGGTCATACTTGTTGGGCTAAAGGGAAGAAAGGTGAACTTAAGGGAATTTCAGTAGCTGTCAAAATCATTACCAAAGCTAAGATGACTTCAGCAATAGCAATTGAAGATGTGAGGAGAGAGGTGAAAATGTTGAAGGCCTTATCTGGACATAGGAATTTGGTCAAGTTTTATGATGCATTTGAGGATGTGAATAACGTCTACATTGTGATGGAGTTGTGCGAGGGTGGAGAATTACTGGACAGAATTCTAGATAGAGGTGGAAGATACACAGAGGAAGACGCCAAAGTTATTCTTCTACAAATTCTGAATGTAGTTGCCTTTTGTCATCTCCAGGGAGTTGTTCATCGCGATCTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGATGAGGATGCTGTTCTGAAAGTTATTGATTTTGGTCTATCTGATTTTGTTAGACCAGAGCAGCGCCTCAATGATATTGTTGGTAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGCGTTGAAGCAGACTTGTGGAGTGTTGGAGTTATATCGTACATATTGTTATGTGGAAGTAGACCGTTTTGGGCACGGACAGAATCAGGAATTTTCCGGTCTGTGTTACGAGCAAATCCTAACTTTGATGATTCACCTTGGCCATCAATTTCACCGGAAGCTAAAGACTTCGTGAAGAGACTTTTGAACAAGGACCACAGGAAAAGGATGACTGCTGCTCAAGCTTTATCTCACCCATGGTTGAGAGATGAAAAAAATGTCGTTCCTTTAGATATTTTGATTTACAAGTTAGTCAAGTCATATGTGCGCGCCTCGCCATTGAAACGTGCGGCACTGAAGGCTCTCTCAAAAGCATTGCCGGTGGACGAGGTTACCTACCTCAGAGCACAATTTAGCCTCTTGGAACCTAAAGATGGTTGCATTTCACTTGAGAATTTCAGAGTTGCTCTCATGAAAAATGCAACTGACGCCATGAAGGAGGCAAGGGTCCCTGACATTCTAAATTTGATGGATCCACTCTCCTATAAAAGATTGGACTTCGAAGAGTTTTGCGCTGCTGCAATCAGTGTATACCAGCTGGAAGTTCATCCAGAATGGGAAAGAATTGCCACCACAGCTTATGATTATTTTGACGAGGCAGGGAACCGTGTCATTTCAGTCGAAGAGTTGGCACAGGAGATGAATTTGGGTCCTTCTGCTTACTCTCTAATGGGTGATTGGATCAGAAAATCTGATGGAAAACTCAGCTTGGTCGGATATACAAAGTATTTGCATGGTGTCACAATTCGTTCAAATACAAGACACAGATAG 1767 0.4488 MGHCCSKSIAVDNETVATDHHHKPPPHHTPSPLSVSQPVSGVSDATPGRQTPATSFSTSPFNSPLPAGVMPSPATKTPGRKFRWPLPPPSPAKPIMDLYRKMKPKDGPIPEEHGEGGGGGERTLDKSFGYGKNFGAKFELGKEVGRGHFGHTCWAKGKKGELKGISVAVKIITKAKMTSAIAIEDVRREVKMLKALSGHRNLVKFYDAFEDVNNVYIVMELCEGGELLDRILDRGGRYTEEDAKVILLQILNVVAFCHLQGVVHRDLKPENFLFVSKDEDAVLKVIDFGLSDFVRPEQRLNDIVGSAYYVAPEVLHRSYSVEADLWSVGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALSHPWLRDEKNVVPLDILIYKLVKSYVRASPLKRAALKALSKALPVDEVTYLRAQFSLLEPKDGCISLENFRVALMKNATDAMKEARVPDILNLMDPLSYKRLDFEEFCAAAISVYQLEVHPEWERIATTAYDYFDEAGNRVISVEELAQEMNLGPSAYSLMGDWIRKSDGKLSLVGYTKYLHGVTIRSNTRHR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3165 588 Gene3D - 439 507 - -
Mtr3g3165 588 Gene3D - 417 547 - -
Mtr3g3165 588 SUPERFAMILY Protein kinase-like (PK-like) 137 424 IPR011009 -
Mtr3g3165 588 MobiDBLite consensus disorder prediction 17 93 - -
Mtr3g3165 588 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 49 582 - -
Mtr3g3165 588 PANTHER SERINE/THREONINE-PROTEIN KINASE 49 582 - -
Mtr3g3165 588 Gene3D Phosphorylase Kinase; domain 1 132 227 - -
Mtr3g3165 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Mtr3g3165 588 MobiDBLite consensus disorder prediction 33 65 - -
Mtr3g3165 588 Pfam Protein kinase domain 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3165 588 CDD STKc_CAMK 137 399 - -
Mtr3g3165 588 ProSiteProfiles Protein kinase domain profile. 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3165 588 SMART serkin_6 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3165 588 Gene3D Transferase(Phosphotransferase) domain 1 228 416 - -
Mtr3g3165 588 SUPERFAMILY EF-hand 433 577 IPR011992 -
Mtr3g3165 588 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3165 Mtr-Chr3 45583141 45589568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3165 33 587 EF-hand Containing Proteins AT3G50530 57.978 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr3g3165 Pkinase 7.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3165 - - var:108331904 989.564