Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3163 ATGAGATATTGTTTTCTTTTGCTTGTATCACTTGTTATTCTCAACACTTCATTGTCATCTGGATACACATCTAGGGTTGATGGCAAGGAAGGGTGGCCAGTCAAACCCTCATCAGGCTACAATGTATTGACTAGCGGAATCAAACTTCTAATACACGACAACATTTATTTCAAGTATAACAAAGAAATTGATTCAGTGTTGGTTGTAAACAAACAAGATCATGATTCATGCAACACCAAAAACCCGATTTACAAGATGGAAGGTGGAGATTCAGCCTTTCAATTGGACAAGTCAGGTCCCTTTTACTTCATTAGTGGAAACGTTGAGAATTGCCAAAAGGGTAGAAAGTTAAACGTTGTCGCTTGGTTTCCACATCGGCGATTAATGTCTCTGGCAGCGGATGCTCCTTCGCCAAGTATGGTACAAGTTCCAGCAATGTCTCCTACAGTCAATGCTCCGACACCAAATGTCATTGGCTGGAATGCTCCTGCGCCAAGTCCTGCCGACATTCATGCTCCATCACCAAGTCCAACAACCAATCATGCTCCGGTACCAAGTCCTACCGACAATCATGCTTCGACACCAAATCCAAGTGGCAATCATGCTCCAGCACCAAGTGCTACCAATATCCAAGTGTCACCGACACCAAGTGCCACCCATAAAAAGTGCCATCGACGTCGGCACTGGGGTCTCTGTTTTGGCTCCAAGTGCCACCGGGATTCATGCTCTGACATTGCGCCATCTCCTGGTCATTCGGGCTCTACAAGGTTGAGTGGTTCTGTTGGTGTCAATGTTGTGGTGGCATTGGTATTAGGAAGCCTTGCTTTTTAG 831 0.4537 MRYCFLLLVSLVILNTSLSSGYTSRVDGKEGWPVKPSSGYNVLTSGIKLLIHDNIYFKYNKEIDSVLVVNKQDHDSCNTKNPIYKMEGGDSAFQLDKSGPFYFISGNVENCQKGRKLNVVAWFPHRRLMSLAADAPSPSMVQVPAMSPTVNAPTPNVIGWNAPAPSPADIHAPSPSPTTNHAPVPSPTDNHASTPNPSGNHAPAPSATNIQVSPTPSATHKKCHRRRHWGLCFGSKCHRDSCSDIAPSPGHSGSTRLSGSVGVNVVVALVLGSLAF* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3163 276 MobiDBLite consensus disorder prediction 157 225 - -
Mtr3g3163 276 ProSiteProfiles Phytocyanin domain profile. 22 123 IPR003245 GO:0009055
Mtr3g3163 276 Pfam Plastocyanin-like domain 32 114 IPR003245 GO:0009055
Mtr3g3163 276 PANTHER EARLY NODULIN-LIKE PROTEIN 1 270 - -
Mtr3g3163 276 Gene3D - 22 122 IPR008972 -
Mtr3g3163 276 MobiDBLite consensus disorder prediction 168 182 - -
Mtr3g3163 276 SUPERFAMILY Cupredoxins 22 121 IPR008972 -
Mtr3g3163 276 MobiDBLite consensus disorder prediction 183 218 - -
Mtr3g3163 276 PANTHER BLUE COPPER PROTEIN 1 270 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3163 Mtr-Chr3 45554288 45555474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3163 1 120 Phytocyanin Superfamily AT4G27520 48.333 1.02e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3163 - - mtr:MTR_3g092170 543.117