Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3155 ATGTCGTCGAATTCACCAGCATCAGAATCTAAGTTTGTAACTGATTTGATTTTATTAGCGGCGAGCGCCGCATTCAGTTGCTTAATATTGTACACCGGTTATTCATATCTTGACCCGAACCGTCAATCATCCAAAAAAGCCCTCGAACATAAGAAAGCCATTGCAAATCGTCTTGGTCGTCCTCTCATTAAAACCAATCAATACGAAGATGTAATAGCCGGTGATGTTATAAATCCTGACCACATCGATGTTGAGTTCGACAGTATCGGAGGATTGGAAACTATTAAAGAAGCTTTGTTTGAGCTTGCTATTCTTCCTTTGAAACGATCAGAATTGTTTACCCATGGAAAGCTCTTGGGGCCTCAAAAGGGTGTCTTGTTGTATGGACCACCTGGTACTGGCAAAACCATGCTTGCTAAAGCTATTGCTAAGGAGTGTGGAGCAGCTTTCATTAATGTTAGGATGTCTAATCTCATGAGCATGTGGTTCGGCGATGCCACTAAGCTCGTGGCTGCCATATTTAGCTTGGCTTATAAGCTTCAGCCTGCTATCATATTCATTGATGAAGTAGACAGTTTTTTGGGTCAACGTCGTTCATCAGATCACGAGGCTTCGCTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGGTTCAGCACCGACCAGAGTGCTCGAGTTATGGTACTTGCAGCAACTAATCGCCCTTCAGAACTTGATGAAGCAATACTTCGGCGTTTTCCTCAAGCCTTTGAAGTTGGAATTCCAGACCAGAAAGAGAGGGCTGAGATATTGAAGGTTATCTTAAAGGGCGAGAGGGTTGAAGATAACATAGACTTCAGTTATATAGCTGGTTTATGCAAGGGTTACACCGGTTCAGATCTATTTGATCTTTGCAAGAAGGCTGCATATTTTCCTATTAGAGAACTGCTGGATGATGAGAAGAAAGGGAAACAATCTCAAGAACCTAGACCTTTGTCGCAGTTTGATTTAGAGAATGCCCTTTCCACTTCACGGACGACGGCTGTTGCAAGCGAGTATGGTGTGTCATCATCAAGACGGACGTTTCCTGATTAA 1077 0.4299 MSSNSPASESKFVTDLILLAASAAFSCLILYTGYSYLDPNRQSSKKALEHKKAIANRLGRPLIKTNQYEDVIAGDVINPDHIDVEFDSIGGLETIKEALFELAILPLKRSELFTHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKECGAAFINVRMSNLMSMWFGDATKLVAAIFSLAYKLQPAIIFIDEVDSFLGQRRSSDHEASLNMKTEFMALWDGFSTDQSARVMVLAATNRPSELDEAILRRFPQAFEVGIPDQKERAEILKVILKGERVEDNIDFSYIAGLCKGYTGSDLFDLCKKAAYFPIRELLDDEKKGKQSQEPRPLSQFDLENALSTSRTTAVASEYGVSSSRRTFPD* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3155 358 Gene3D - 83 342 IPR027417 -
Mtr3g3155 358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 312 IPR027417 -
Mtr3g3155 358 Gene3D - 256 338 - -
Mtr3g3155 358 SMART AAA_5 121 257 IPR003593 -
Mtr3g3155 358 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 7 344 - -
Mtr3g3155 358 CDD AAA 90 254 - -
Mtr3g3155 358 Pfam AAA+ lid domain 277 312 IPR041569 -
Mtr3g3155 358 Pfam ATPase family associated with various cellular activities (AAA) 125 253 IPR003959 GO:0005524|GO:0016887
Mtr3g3155 358 ProSitePatterns AAA-protein family signature. 227 246 IPR003960 GO:0005524|GO:0016887
Mtr3g3155 358 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 7 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3155 Mtr-Chr3 45491774 45496587 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3155 84 315 Calmodulin-binding Proteins AT3G56690 34.874 3.83e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3155 K22530 - gmx:100796908 567