Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3119 ATGGGTAAGAAAGGAAGCAGTTGGTTCTCATCTGTGAAGAAAGTTTTCAAGTCTTCTTCTAAGGACTCAACTTTACAAGAGAACAAGAAGGAAAAGGAAGAGAATTGGCAGCATGAAGCAGCAGAGGAGGTATCTATGGAGCATTTTCCTGCATATAGTTCACCAGATATCACCAATGAAGGAAGCACCACATCAACACCCTTAACAGAAGAGAGAAATCATGCAATTGCCTATGCTGCAGCAACAGCAGCAGCAGCTGAAGCTGCAGTGGCTGCGGCTCAAGCAGCTGCTAGAGTTGTGAGATTGGCAGGTCATGGACGTAACTCTAAGGTCGAAAAAGCAGCAATACTAATTCAATCCTACTATAGAGGATACCTAGCTCGACGTGCACTGCGTGCTTTGAAGGGATTAGTGAGATTGCAGGCACTTGTGAGAGGACATAATGTGCGGAAGCAAGCACAGATGACCATGCGTTGCATGCAAGCATTGGTAAGGGTTCAGGCAAGAGTAAGAGCTCGCAGACTCCAATTGACTCATGGCAAACACGAGAGGACAGTAGTGGAACAACATCCTACGACAAAGTTAGACACAAATGGTTGGGACTATAGGCGTCAAAGTAGCCAGAAAATTAAGGACACTGATTTCAGGAAACATGGAACTACAATGAATAAGGAGAAAGCTCTTCCATACGCTTTCAACTGCCAGCAACTGCAGAAGCAATATTTGCACATAGACCCAAATGTTGATGATAGTGAAAGTTACAGCAATGAGCGTGAAAGAGCCCAATTGGATTGGAACTGGTTGGAACGTTGGATGTTATCACAATCAAACAATGTTAGGCCCTTAGGGTTGGGGCCACTTGAGACCCCACCATATACACCCACTGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGTTGCACCACGAGACTCAATCCATGCAAACATGGGCCTCATGAACCAAGAATTTCGTGATTTAAGTCCAATCTCTAAACACCACCAACGACACCACAGTGGAGGTGTACCTAGCTATATGGCCCCAACACAGTCTGCAAAGGCCAAGATTAAAAGTCAAGGCCCATCAAAGCATCGGGCGTCGTTTGGGTCTTATTGGAGCTTGTCAGCACGGAGTCCTCCTACTGGGCTGGGCTATGATTCATCTGGCTCTGGTGGGGCCACTGCTGCTCATCCAATTACAAGAAGCCCAAGCCCAAAAATTAACGGGATTCGCCTTCAATCTAAACGGATATTGGGTGCTGGTGTTGAGGATTGGCCCATTCCCCCTGGAGGTCATGGCTGGACAAGATTTGATTGA 1323 0.4618 MGKKGSSWFSSVKKVFKSSSKDSTLQENKKEKEENWQHEAAEEVSMEHFPAYSSPDITNEGSTTSTPLTEERNHAIAYAAATAAAAEAAVAAAQAAARVVRLAGHGRNSKVEKAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLTHGKHERTVVEQHPTTKLDTNGWDYRRQSSQKIKDTDFRKHGTTMNKEKALPYAFNCQQLQKQYLHIDPNVDDSESYSNERERAQLDWNWLERWMLSQSNNVRPLGLGPLETPPYTPTDDMSEEKTVEMDMVAPRDSIHANMGLMNQEFRDLSPISKHHQRHHSGGVPSYMAPTQSAKAKIKSQGPSKHRASFGSYWSLSARSPPTGLGYDSSGSGGATAAHPITRSPSPKINGIRLQSKRILGAGVEDWPIPPGGHGWTRFD* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3119 440 PANTHER IQ-DOMAIN 21 1 408 - -
Mtr3g3119 440 Pfam Protein of unknown function (DUF4005) 330 368 IPR025064 -
Mtr3g3119 440 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Mtr3g3119 440 MobiDBLite consensus disorder prediction 23 39 - -
Mtr3g3119 440 SMART iq_5 133 154 IPR000048 GO:0005515
Mtr3g3119 440 SMART iq_5 110 132 IPR000048 GO:0005515
Mtr3g3119 440 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
Mtr3g3119 440 Pfam IQ calmodulin-binding motif 138 153 IPR000048 GO:0005515
Mtr3g3119 440 Gene3D - 108 162 - -
Mtr3g3119 440 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Mtr3g3119 440 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Mtr3g3119 440 MobiDBLite consensus disorder prediction 383 409 - -
Mtr3g3119 440 MobiDBLite consensus disorder prediction 383 399 - -
Mtr3g3119 440 MobiDBLite consensus disorder prediction 1 39 - -
Mtr3g3119 440 MobiDBLite consensus disorder prediction 334 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3119 Mtr-Chr3 45129575 45134238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3119 1 408 IQD Protein Family AT3G49260 47.111 2.50e-86 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3119 - - aprc:113873497 499.59