Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3103 ATGGCACTTTGTAGAACTGGGCCATACCCGATTTTGGAGAGCAATGTCCTAGCTTATTCACATATCAATTTGTCGACAAGGCTTGTTTTACCCGTTCCCCTGCGTTTTGCTGGACAATCATCGAATGCAGGCAAGAGAAAGCACAAGGTAATATGCAGTTCTTCACTACGGAGATCTGCATCTGCTTCTTCAATGGAGTCGCATGAAGAGGTTCCAAAGACCTCTTCCGTTTGCTTGGAGGAGGAAACAGATCATGTTATGAGGTTCAAAATGTCAGACTTTAAGGTTTTAGATCGTGTTAGCATTGGCCTTGGTGGACGGGCGGATGAGGTGGTGTTTGAAGGCAAGGTGAAGGACAGTGGTAGCCCTTTGTATAACACAAGAGTTATACTTCGACAGCTTTATAGTTCCCAAGCTCAGCGTCGAGGAAAACGAGCAATAGAGGTATTGAAGAAGCTGGGTCGCCGTAAACTTTTGTATCATTCTTACTCAATGCAAGTTCATGGCTATATCTCGTTGCCTGCAAGTGGTGGTAGTGGTTCATTTATTCTAGTCCATGGGTATCATGGTAGTTTTTCTCTGAGACACTGGCTTCAACAGTCAGATTGGCTTCAAACTTTAGAGGCCACTCTTGCACTGGACGAAGAATCTGTTAGGAAAGTAGGAGAAGACACAACTGGAGGTCCCGCGATTTCTAGACAATTGCGACTAATTCGAATATTGATGAGAGATCTTCTAATTGGAGTAAATTACCTGCATAGTCATGGTCTTGCCCATACAGATTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGACATATCAAAGTAGGCACACTGGGAAATGCCGCTGACTTTTGCGAGGATGGTTCAAATAGCGGCTCTATGGAAAACATGGACAGGCGACAGATGATGATTGCATTTGACATGAGATGCATGGGTTTCATAATGGCAAAAATGGTAATGGGAGAACTTATGGATCCTTTGATATTCGCGAAGTTCAAATCATTCCTCACAAAGGGGAATGATCCTTCATGTTTGCGACAGCTTATGATGGAAATCCTCGGCAGAAACTCTCCATATGGAAATGCTGGCTTACAAATGCTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCTTTATTGCTAGCAACCAAACCTTCTCGGAGAATAAGTTGTTTGGATGCTCTAAGGCACCCATTCCTTTGTGGGCCAAGATGGCGAGTAGTTCCATCAATGGATATTATCAGATGGGGTCTAGGTTGCACTGCAATGCGTATTAGTGAGGAGTACATTTATCGTCAGCCTCAGCGCAGTAGGCTTGCCCACTTCATTGACTTATTGGAGATGTTGAATCCTCATCCAAAGCCAAAGAACTGGCTGGAGCTGCTTCCAGGAAAATGGCGCCTATTGTATTGCACTGGGAGGCATGTTGGGCTGACCCTTCGCCAACCTCCTGTCCGTGTACTAGTTGGAGATTTGCATTTAACTGTTAATAGAGAATCAAAGTTGAAGGCCAACCTTTCCTTCGTCTCTGACATTGGATTCTCAGTCATGATTGGTCAGGACTGGCCTCATGACAAAGCTGGTAAAAGAGGAAGAGTGCAGGTGAATTCTTCATTTATACTAAGAGCTGGGAGACGGTTATATCTGAAGCAAGACAATACCTCAGAGAGGCTCTCCTTTCGCCCTTCCGGCAATGAGGAGGCTTTAGCTCAGAAATTTTCTAGCAAGAAATGGAGAAAAATAACCCCTTTCAAGGAGTTTCCATCAAGTCTCCCTGCAGCCAAGTTTACGTCGGGTGATATTGATGTGACAATGAATCTCGATGATCCTTTAAATCAAAACATTGATACTGTTCAAAATGTTCTTCAAGAACTAAGAACACAAATTCCCCCTGAAATATTTGATTTGTCAAAGATTGTGTGTGGAACTTATGTGGACTCAAGGTTGCTCGTTCTTCGAGGGGTTAATGGATCAGCTCTCCTTTTTACAAGGTCTTTTGTGGACACAGACAGTTCTAGTTAA 2034 0.4371 MALCRTGPYPILESNVLAYSHINLSTRLVLPVPLRFAGQSSNAGKRKHKVICSSSLRRSASASSMESHEEVPKTSSVCLEEETDHVMRFKMSDFKVLDRVSIGLGGRADEVVFEGKVKDSGSPLYNTRVILRQLYSSQAQRRGKRAIEVLKKLGRRKLLYHSYSMQVHGYISLPASGGSGSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEESVRKVGEDTTGGPAISRQLRLIRILMRDLLIGVNYLHSHGLAHTDLRLENVHISPIDRHIKVGTLGNAADFCEDGSNSGSMENMDRRQMMIAFDMRCMGFIMAKMVMGELMDPLIFAKFKSFLTKGNDPSCLRQLMMEILGRNSPYGNAGLQMLDRNWGAGWHLLSLLLATKPSRRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGCTAMRISEEYIYRQPQRSRLAHFIDLLEMLNPHPKPKNWLELLPGKWRLLYCTGRHVGLTLRQPPVRVLVGDLHLTVNRESKLKANLSFVSDIGFSVMIGQDWPHDKAGKRGRVQVNSSFILRAGRRLYLKQDNTSERLSFRPSGNEEALAQKFSSKKWRKITPFKEFPSSLPAAKFTSGDIDVTMNLDDPLNQNIDTVQNVLQELRTQIPPEIFDLSKIVCGTYVDSRLLVLRGVNGSALLFTRSFVDTDSSS* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3103 677 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 14, CHLOROPLASTIC-RELATED 71 670 - -
Mtr3g3103 677 Gene3D Transferase(Phosphotransferase) domain 1 230 406 - -
Mtr3g3103 677 Pfam Protein kinase domain 237 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3103 677 Pfam PAP_fibrillin 439 663 IPR006843 -
Mtr3g3103 677 PANTHER CELL DIVISION PROTEIN KINASE 71 670 - -
Mtr3g3103 677 SUPERFAMILY Protein kinase-like (PK-like) 87 416 IPR011009 -
Mtr3g3103 677 ProSiteProfiles Protein kinase domain profile. 94 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3103 677 SMART serkin_6 94 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3103 214 410 AGC Kinase Gene Family AT3G10540 27.434 8.44e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Mtr3g3103 PAP_fibrillin 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3103 - - ccaj:109796635 1137.09